RNA–Protein interactions for RNA: ENST00000489049.5

PDCD4-209, Transcript of programmed cell death 4, humanhuman

TSL 2

Gene PDCD4, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-209ENST00000489049 PCDHA3Q9Y5H8 950 aa7.04□□□□□ -1.28
PDCD4-209ENST00000489049 ALG6Q9Y672 507 aa7.04□□□□□ -1.28
PDCD4-209ENST00000489049 ZNF236Q9UL36 1845 aa7.04□□□□□ -1.28
PDCD4-209ENST00000489049 NRCAMQ92823 1304 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 INO80B-WBP1J3KQ70 363 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 MYO1FO00160 1098 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 ABLIM1O14639 778 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 NCK2O43639 380 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 LGALS2P05162 132 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 WEE2P0C1S8 567 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 FAM163BP0C2L3 166 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 TMEM191BP0C7N4 346 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 SRGAP2CP0DJJ0 459 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 GNAT1P11488 350 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 UNGP13051 313 aaPredicted RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 INSRRP14616 1297 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 ACO1P21399 889 aaKnown RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 ABCB4P21439 1286 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 EIF4BP23588 611 aaKnown RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 CHRNA3P32297 505 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 CTNNA1P35221 906 aaKnown RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 ACOT2P49753 483 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 SOX10P56693 466 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 RWDD2BP57060 319 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 NOP14P78316 857 aaKnown RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 TAGLNQ01995 201 aaKnown RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 MBTD1Q05BQ5 628 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 ACVR2BQ13705 512 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 STILQ15468 1287 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 ZNF568Q3ZCX4 644 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 LARP7Q4G0J3 582 aaKnown RBP eCLIP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 CFAP58Q5T655 872 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 SEL1L2Q5TEA6 688 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 LRRC38Q5VT99 294 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 CEP128Q6ZU80 1094 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 MOB2Q70IA6 237 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 TRMT1LQ7Z2T5 733 aaKnown RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 GPR142Q7Z601 462 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 SLC47A2Q86VL8 602 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 RHPN2Q8IUC4 686 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 FBXO16Q8IX29 292 aaPredicted RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 MCOLN2Q8IZK6 566 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 NME8Q8N427 588 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 UBR7Q8N806 425 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 TMEM35BQ8NCS4 154 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 GADD45GIP1Q8TAE8 222 aaPredicted RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 ZNF564Q8TBZ8 553 aaPredicted RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 SLC20A1Q8WUM9 679 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 SOCS4Q8WXH5 440 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 SEC14L1Q92503 715 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 MAML3Q96JK9 1138 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 NCAPGQ9BPX3 1015 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 ZSWIM1Q9BR11 485 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 ADPGKQ9BRR6 497 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 LRRC1Q9BTT6 524 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 KATNBL1Q9H079 304 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 LHX5Q9H2C1 402 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 RBM12Q9NTZ6 932 aaKnown RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 PARVAQ9NVD7 372 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 PSD3Q9NYI0 1048 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 KIAA1522Q9P206 1035 aaPredicted RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 WDR35Q9P2L0 1181 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 ANKFY1Q9P2R3 1169 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 STRIP2Q9ULQ0 834 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 UTP11Q9Y3A2 253 aaKnown RBP7.03□□□□□ -1.28
PDCD4-209ENST00000489049 C2CD2Q9Y426 696 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 PCDHB4Q9Y5E5 795 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 U3KQE9 123 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 LRRC37A2A6NM11 1700 aa7.03□□□□□ -1.28
PDCD4-209ENST00000489049 ZNFX1Q9P2E3 1918 aaKnown RBP7.02□□□□□ -1.29
PDCD4-209ENST00000489049 SMIM35A0A1B0GVV1 85 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 PSTPIP1O43586 416 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 SPOPO43791 374 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 HSF2BPO75031 334 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 PROSCO94903 275 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 HEXIM1O94992 359 aaKnown RBP7.02□□□□□ -1.29
PDCD4-209ENST00000489049 VNN1O95497 513 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 SNAI1O95863 264 aaPredicted RBP7.02□□□□□ -1.29
PDCD4-209ENST00000489049 MMEP08473 750 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 CYP2C8P10632 490 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 CD8BP10966 210 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 FUT4P22083 530 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 GNA15P30679 374 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 CXCR5P32302 372 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 CDH5P33151 784 aaPredicted RBP7.02□□□□□ -1.29
PDCD4-209ENST00000489049 FNTAP49354 379 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 CPT1AP50416 773 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 PEX5P50542 639 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 CBX1P83916 185 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 LMNB2Q03252 620 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 C2orf54Q08AI8 447 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 PPFIA1Q13136 1202 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 ACAP1Q15027 740 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 CYP1B1Q16678 543 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 ZNF667Q5HYK9 610 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 PLEKHA7Q6IQ23 1121 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 MTHFD1LQ6UB35 978 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 EEPD1Q7L9B9 569 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 PDZD3Q86UT5 571 aa7.02□□□□□ -1.29
PDCD4-209ENST00000489049 RBBP8NLQ8NC74 664 aaPredicted RBP7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms