RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 ECHDC2Q86YB7 292 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 EXD1Q8NHP7 514 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 GIMAP7Q8NHV1 300 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 ADAM22Q9P0K1 906 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 MCM8Q9UJA3 840 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 NAALADL1Q9UQQ1 740 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 STYXL1Q9Y6J8 313 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 SCINQ9Y6U3 715 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 SPTBN5Q9NRC6 3674 aaKnown RBP19.19■□□□□ 0.66
COL16A1-215ENST00000488897 A0A0U1RQF3 1178 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 LACTBL1A8MY62 500 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 B4GALT3O60512 393 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 FGBP02675 491 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 C4BPAP04003 597 aaKnown RBP19.19■□□□□ 0.66
COL16A1-215ENST00000488897 RABGGTBP53611 331 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 IZUMO3Q5VZ72 239 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 SPATA21Q7Z572 469 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 TBC1D1Q86TI0 1168 aaPredicted RBP19.19■□□□□ 0.66
COL16A1-215ENST00000488897 RIBC1Q8N443 379 aaPredicted RBP19.19■□□□□ 0.66
COL16A1-215ENST00000488897 CCHCR1Q8TD31 782 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 C18orf25Q96B23 403 aaPredicted RBP19.19■□□□□ 0.66
COL16A1-215ENST00000488897 MAGEB18Q96M61 343 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 TSPYL2Q9H2G4 693 aaPredicted RBP19.19■□□□□ 0.66
COL16A1-215ENST00000488897 LTBP2Q14767 1821 aa19.19■□□□□ 0.66
COL16A1-215ENST00000488897 C5orf42Q9H799 3197 aa19.18■□□□□ 0.66
COL16A1-215ENST00000488897 OGTO15294 1046 aa19.18■□□□□ 0.66
COL16A1-215ENST00000488897 GJB6O95452 261 aa19.18■□□□□ 0.66
COL16A1-215ENST00000488897 ABHD2P08910 425 aa19.18■□□□□ 0.66
COL16A1-215ENST00000488897 PIK3CAP42336 1068 aa19.18■□□□□ 0.66
COL16A1-215ENST00000488897 WDR5P61964 334 aaKnown RBP19.18■□□□□ 0.66
COL16A1-215ENST00000488897 CLLU1OSQ5K130 101 aa19.18■□□□□ 0.66
COL16A1-215ENST00000488897 SLC24A5Q71RS6 500 aa19.18■□□□□ 0.66
COL16A1-215ENST00000488897 PAAF1Q9BRP4 392 aa19.18■□□□□ 0.66
COL16A1-215ENST00000488897 RBAKQ9NYW8 714 aaPredicted RBP19.18■□□□□ 0.66
COL16A1-215ENST00000488897 BAIAP2L1Q9UHR4 511 aa19.18■□□□□ 0.66
COL16A1-215ENST00000488897 CPSF3Q9UKF6 684 aaKnown RBP19.18■□□□□ 0.66
COL16A1-215ENST00000488897 SCNN1GP51170 649 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 MAMLD1Q13495 774 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 MPP2Q14168 576 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 CNKSR3Q6P9H4 555 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 PHF13Q86YI8 300 aaPredicted RBP19.17■□□□□ 0.66
COL16A1-215ENST00000488897 GSTCDQ8NEC7 633 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 GRAMD1AQ96CP6 724 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 TGS1Q96RS0 853 aaKnown RBP19.17■□□□□ 0.66
COL16A1-215ENST00000488897 C11orf70Q9BRQ4 267 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 AGAP1Q9UPQ3 857 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 CLTAP09496 248 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 NQO1P15559 274 aaKnown RBP19.17■□□□□ 0.66
COL16A1-215ENST00000488897 TAS2R40P59535 323 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 ZNF268Q14587 947 aaPredicted RBP19.17■□□□□ 0.66
COL16A1-215ENST00000488897 PLEKHA7Q6IQ23 1121 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 LLGL2Q6P1M3 1020 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 CYP4X1Q8N118 509 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 OR5B17Q8NGF7 314 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 GDAP1Q8TB36 358 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 ACAP3Q96P50 834 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 ECT2Q9H8V3 914 aa19.17■□□□□ 0.66
COL16A1-215ENST00000488897 CSPG5O95196 566 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 NFICP08651 508 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 ACO1P21399 889 aaKnown RBP19.16■□□□□ 0.66
COL16A1-215ENST00000488897 KLRC2P26717 231 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 NCALDP61601 193 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 NOMO3P69849 1222 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 BNIP1Q12981 228 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 NR1H3Q13133 447 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 CUL2Q13617 745 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 C2CD6Q53TS8 623 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 TDRD10Q5VZ19 366 aaKnown RBP19.16■□□□□ 0.66
COL16A1-215ENST00000488897 GSTA5Q7RTV2 222 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 ZCCHC9Q8N567 271 aaKnown RBP19.16■□□□□ 0.66
COL16A1-215ENST00000488897 GPATCH11Q8N954 259 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 PWWP2AQ96N64 755 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 MLXIPLQ9NP71 852 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 PRKAG3Q9UGI9 489 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 TBK1Q9UHD2 729 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 PCDHB4Q9Y5E5 795 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 NR2E3Q9Y5X4 410 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 TRIOBPQ9H2D6 2365 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 ARL5CA6NH57 179 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 RPLP2P05387 115 aaKnown RBP19.16■□□□□ 0.66
COL16A1-215ENST00000488897 MCF2P10911 925 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 MAGEA4P43358 317 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 COPS2P61201 443 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 C1QBPQ07021 282 aaKnown RBP19.16■□□□□ 0.66
COL16A1-215ENST00000488897 JADE1Q6IE81 842 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 SLFN12LQ6IEE8 588 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 SRRM1Q8IYB3 904 aaKnown RBP19.16■□□□□ 0.66
COL16A1-215ENST00000488897 CFAP57Q96MR6 1250 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 RXFP1Q9HBX9 757 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 SQORQ9Y6N5 450 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 TTC3P53804 2025 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 MICAL3Q7RTP6 2002 aa19.16■□□□□ 0.66
COL16A1-215ENST00000488897 AXLP30530 894 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 GNA15P30679 374 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 SSR1P43307 286 aaKnown RBP19.15■□□□□ 0.66
COL16A1-215ENST00000488897 SOX4Q06945 474 aaPredicted RBP19.15■□□□□ 0.66
COL16A1-215ENST00000488897 PPIGQ13427 754 aaKnown RBP eCLIP19.15■□□□□ 0.666e-9■■■■■ 43.5
COL16A1-215ENST00000488897 DAB2IPQ5VWQ8 1189 aa19.15■□□□□ 0.66
COL16A1-215ENST00000488897 ZNF598Q86UK7 904 aaKnown RBP19.15■□□□□ 0.66
COL16A1-215ENST00000488897 ZNF280BQ86YH2 543 aa19.15■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms