RNA–Protein interactions for RNA: ENST00000488596.5

CD46-215, Transcript of CD46 molecule, humanhuman

TSL 3

Gene CD46, Length 872 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-215ENST00000488596 MYL4P12829 197 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 PPP3CBP16298 524 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 KCNA3P22001 575 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 EEF1GP26641 437 aaKnown RBP3.89□□□□□ -1.79
CD46-215ENST00000488596 ACVR2AP27037 513 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 CD6P30203 668 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 LRPAP1P30533 357 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 PPM1AP35813 382 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 IL6STP40189 918 aaPredicted RBP3.89□□□□□ -1.79
CD46-215ENST00000488596 PTDSS1P48651 473 aaKnown RBP3.89□□□□□ -1.79
CD46-215ENST00000488596 HSPA7P48741 367 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 CPT1AP50416 773 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 DGKEP52429 567 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 PRKAG1P54619 331 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 LOXL3P58215 753 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 SSBP2P81877 361 aaPredicted RBP3.89□□□□□ -1.79
CD46-215ENST00000488596 TFF2Q03403 129 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 STK3Q13188 491 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 ARHGEF7Q14155 803 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 KCNAB1Q14722 419 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 PTPRRQ15256 657 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 TXNRD1Q16881 649 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 MPEG1Q2M385 716 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 SLC35G1Q2M3R5 365 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 NBPF8Q3BBV2 869 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 MGAT5BQ3V5L5 792 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 CACHD1Q5VU97 1274 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 KIAA1614Q5VZ46 1190 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 PLAG1Q6DJT9 500 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 FCRL6Q6DN72 434 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 RGS7BPQ6MZT1 257 aaPredicted RBP3.89□□□□□ -1.79
CD46-215ENST00000488596 SDR16C5Q8N3Y7 309 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 VGLL2Q8N8G2 317 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 MYCBPAPQ8TBZ2 947 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 TMEM171Q8WVE6 324 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 C18orf8Q96DM3 657 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 PPP1R9BQ96SB3 815 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 PSMD1Q99460 953 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 COLEC11Q9BWP8 271 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 TPSD1Q9BZJ3 242 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 CXorf36Q9H7Y0 433 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 GBA2Q9HCG7 927 aaPredicted RBP3.89□□□□□ -1.79
CD46-215ENST00000488596 PTPRHQ9HD43 1115 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 ARFGAP3Q9NP61 516 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 DNMT3BQ9UBC3 853 aaKnown RBP3.89□□□□□ -1.79
CD46-215ENST00000488596 SSX2IPQ9Y2D8 614 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 WNT6Q9Y6F9 365 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 FER1L4A9Z1Z3 1794 aa3.89□□□□□ -1.79
CD46-215ENST00000488596 A0A087WZ62 844 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 AREL1O15033 823 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 TP73O15350 636 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 TPH1P17752 444 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 ADORA2AP29274 412 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 SOX10P56693 466 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 SATB1Q01826 763 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 BTKQ06187 659 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 TRIM14Q14142 442 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 E2F2Q14209 437 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 LY6KQ17RY6 165 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 INSCQ1MX18 579 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 DGKKQ5KSL6 1271 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 USP49Q70CQ1 688 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 BEND5Q7L4P6 421 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 SYTL1Q8IYJ3 562 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 DNAJB14Q8TBM8 379 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 POF1BQ8WVV4 589 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 IPCEF1Q8WWN9 437 aaPredicted RBP3.88□□□□□ -1.79
CD46-215ENST00000488596 FAM136AQ96C01 138 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 PGBD1Q96JS3 809 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 ZBTB45Q96K62 511 aaPredicted RBP3.88□□□□□ -1.79
CD46-215ENST00000488596 CRB3Q9BUF7 120 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 ACTRT3Q9BYD9 372 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 WDR12Q9GZL7 423 aaKnown RBP3.88□□□□□ -1.79
CD46-215ENST00000488596 TRMT13Q9NUP7 481 aaKnown RBP3.88□□□□□ -1.79
CD46-215ENST00000488596 FLRT1Q9NZU1 646 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 DKK4Q9UBT3 224 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 LRCH1Q9Y2L9 728 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 PAXBP1Q9Y5B6 917 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 CDY1Q9Y6F8 540 aa3.88□□□□□ -1.79
CD46-215ENST00000488596 KAT6AQ92794 2004 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 WDR27A2RRH5 827 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 FAM234BA2RU67 622 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 RRP9O43818 475 aaKnown RBP3.87□□□□□ -1.79
CD46-215ENST00000488596 PLA2G6O60733 806 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 SRGAP2O75044 1071 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 PIAS2O75928 621 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 CSF1RP07333 972 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 RHOP08100 348 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 TECP42680 631 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 TRAPPC10P48553 1259 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 EIF2B5Q13144 721 aaKnown RBP3.87□□□□□ -1.79
CD46-215ENST00000488596 EZH2Q15910 746 aaKnown RBP3.87□□□□□ -1.79
CD46-215ENST00000488596 ZNF750Q32MQ0 723 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 FAM83BQ5T0W9 1011 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 DEPDC1Q5TB30 811 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 ICE2Q659A1 982 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 C11orf87Q6NUJ2 197 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 CRTC1Q6UUV9 634 aa3.87□□□□□ -1.79
CD46-215ENST00000488596 ZNF782Q6ZMW2 699 aaPredicted RBP3.87□□□□□ -1.79
CD46-215ENST00000488596 CATSPERGQ6ZRH7 1159 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms