RNA–Protein interactions for RNA: ENST00000487604.1

RBM39-234, Transcript of RNA binding motif protein 39, humanhuman

TSL 3

Gene RBM39, Length 370 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-234ENST00000487604 TRIM5Q9C035 493 aa4.48□□□□□ -1.69
RBM39-234ENST00000487604 A1CFQ9NQ94 594 aaKnown RBP4.48□□□□□ -1.69
RBM39-234ENST00000487604 USP19O94966 1318 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 PHGDHO43175 533 aaKnown RBP4.47□□□□□ -1.69
RBM39-234ENST00000487604 FGBP02675 491 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 APEHP13798 732 aaKnown RBP4.47□□□□□ -1.69
RBM39-234ENST00000487604 HOXD9P28356 352 aaPredicted RBP4.47□□□□□ -1.69
RBM39-234ENST00000487604 SLC7A1P30825 629 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 UQCRC1P31930 480 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 DIO1P49895 249 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 COPB1P53618 953 aaKnown RBP4.47□□□□□ -1.69
RBM39-234ENST00000487604 SUMO2P61956 95 aaKnown RBP4.47□□□□□ -1.69
RBM39-234ENST00000487604 LRRC41Q15345 812 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 AWAT1Q58HT5 328 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 SWSAP1Q6NVH7 229 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 SHC4Q6S5L8 630 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 PTCHD4Q6ZW05 846 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 GADD45GIP1Q8TAE8 222 aaPredicted RBP4.47□□□□□ -1.69
RBM39-234ENST00000487604 PNISRQ8TF01 805 aaKnown RBP4.47□□□□□ -1.69
RBM39-234ENST00000487604 B3GNT5Q9BYG0 378 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 CDH19Q9H159 772 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 STK32BQ9NY57 414 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 DNMT3BQ9UBC3 853 aaKnown RBP4.47□□□□□ -1.69
RBM39-234ENST00000487604 USP22Q9UPT9 525 aa4.47□□□□□ -1.69
RBM39-234ENST00000487604 ANKRD62A6NC57 917 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 M0R3H8 397 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 SOCS2O14508 198 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 ADAM10O14672 748 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 SPRY2O43597 315 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 CTNND1O60716 968 aaKnown RBP4.46□□□□□ -1.7
RBM39-234ENST00000487604 RFPL1O75677 317 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 PHKG2P15735 406 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 EPHA3P29320 983 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 POLGP54098 1239 aaPredicted RBP4.46□□□□□ -1.7
RBM39-234ENST00000487604 TIRAPP58753 221 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 ANAPC15P60006 121 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 NPY5RQ15761 445 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 ZNF517Q6ZMY9 492 aaPredicted RBP4.46□□□□□ -1.7
RBM39-234ENST00000487604 MAEAQ7L5Y9 396 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 IRF2BP2Q7Z5L9 587 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 MRPL10Q7Z7H8 261 aaKnown RBP4.46□□□□□ -1.7
RBM39-234ENST00000487604 LINC01465Q8N7H1 131 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 RUNDC1Q96C34 613 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 ZBTB45Q96K62 511 aaPredicted RBP4.46□□□□□ -1.7
RBM39-234ENST00000487604 TMEM60Q9H2L4 133 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 MTMR4Q9NYA4 1195 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 CPNE7Q9UBL6 633 aa4.46□□□□□ -1.7
RBM39-234ENST00000487604 hCG_2014768A0A024R1R8 64 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 LY6G6EA0A0G2JKS1 128 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 TRIM43BA6NCK2 446 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 SRGAP2O75044 1071 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 RASAL1O95294 804 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 PRF1P14222 555 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 ATF7P17544 494 aaPredicted RBP4.45□□□□□ -1.7
RBM39-234ENST00000487604 SUMO3P55854 103 aaPredicted RBP4.45□□□□□ -1.7
RBM39-234ENST00000487604 TIAL1Q01085 375 aaKnown RBP eCLIP4.45□□□□□ -1.73e-16■□□□□ 11
RBM39-234ENST00000487604 GHRHRQ02643 423 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 LARS2Q15031 903 aaKnown RBP4.45□□□□□ -1.7
RBM39-234ENST00000487604 SEC23BQ15437 767 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 INSCQ1MX18 579 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 C4orf46Q504U0 113 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 C10orf25Q5T742 122 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 LIX1LQ8IVB5 337 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 KIAA0319LQ8IZA0 1049 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 MAP4K1Q92918 833 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 SPSB4Q96A44 273 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 TRIM43Q96BQ3 446 aaPredicted RBP4.45□□□□□ -1.7
RBM39-234ENST00000487604 WDYHV1Q96HA8 205 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 SUCLG2Q96I99 432 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 SIGLEC11Q96RL6 698 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 PPP1R9BQ96SB3 815 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 VN1R3Q9BXE9 311 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 C22orf23Q9BZE7 217 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 GAR1Q9NY12 217 aaKnown RBP4.45□□□□□ -1.7
RBM39-234ENST00000487604 ZIM2Q9NZV7 527 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 MGAT4CQ9UBM8 478 aa4.45□□□□□ -1.7
RBM39-234ENST00000487604 LOC102723971A0A1B0GUV8 181 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 CAPN8A6NHC0 703 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 H7C4K7 107 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 PYCARD-AS1I3L0S3 204 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 CD3EAPO15446 510 aaKnown RBP4.44□□□□□ -1.7
RBM39-234ENST00000487604 INSIG1O15503 277 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 RGS10O43665 173 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 HGFP14210 728 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 CREB1P16220 341 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 EPHB1P54762 984 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 LINC00205P59089 165 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 RBMS2Q15434 407 aaKnown RBP4.44□□□□□ -1.7
RBM39-234ENST00000487604 CACHD1Q5VU97 1274 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 TMEM65Q6PI78 240 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 APOA5Q6Q788 366 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 SAMD14Q8IZD0 417 aaPredicted RBP4.44□□□□□ -1.7
RBM39-234ENST00000487604 MAFAQ8NHW3 353 aaPredicted RBP4.44□□□□□ -1.7
RBM39-234ENST00000487604 OSR1Q8TAX0 266 aaPredicted RBP4.44□□□□□ -1.7
RBM39-234ENST00000487604 CUL5Q93034 780 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 VCPIP1Q96JH7 1222 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 SNX15Q9NRS6 342 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 L1RE1Q9UN81 338 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 PAXBP1Q9Y5B6 917 aa4.44□□□□□ -1.7
RBM39-234ENST00000487604 CFAP69A5D8W1 941 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms