RNA–Protein interactions for RNA: ENST00000486533.1

COL12A1-208, Transcript of collagen type XII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL12A1, Length 1,554 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL12A1-208ENST00000486533 MTA2O94776 668 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 EFEMP2O95967 443 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 FGGP02679 453 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 NUDT17P0C025 328 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 SPATA31D3P0C874 917 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 GZMAP12544 262 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 HOXD13P35453 343 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 GPC5P78333 572 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 DHX9Q08211 1270 aaKnown RBP9.51□□□□□ -0.89
COL12A1-208ENST00000486533 ZNF844Q08AG5 666 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 SIGLEC14Q08ET2 396 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 BYSLQ13895 437 aaKnown RBP9.51□□□□□ -0.89
COL12A1-208ENST00000486533 ZNF568Q3ZCX4 644 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 GLRA4Q5JXX5 417 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 GKAP1Q5VSY0 366 aaPredicted RBP9.51□□□□□ -0.89
COL12A1-208ENST00000486533 SPATA31D4Q6ZUB0 917 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 CCDC149Q6ZUS6 474 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 TAOK1Q7L7X3 1001 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 GPR149Q86SP6 731 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 CEP57Q86XR8 500 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 PALB2Q86YC2 1186 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 CACNA2D3Q8IZS8 1091 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 CNPY4Q8N129 248 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 KREMEN2Q8NCW0 462 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 SLC35G2Q8TBE7 412 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 FEZF2Q8TBJ5 459 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 PIK3R5Q8WYR1 880 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 CABS1Q96KC9 395 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 CCT8L2Q96SF2 557 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 ERP44Q9BS26 406 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 DDX47Q9H0S4 455 aaKnown RBP9.51□□□□□ -0.89
COL12A1-208ENST00000486533 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP9.51□□□□□ -0.89
COL12A1-208ENST00000486533 CHST7Q9NS84 486 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 KCNG1Q9UIX4 513 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 DENND4AQ7Z401 1863 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 TRIP11Q15643 1979 aa9.51□□□□□ -0.89
COL12A1-208ENST00000486533 CCDC195A0A1B0GUA6 201 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 SFI1A8K8P3 1242 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 H0YCG3 227 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 K7ENM7 598 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 SLC16A4O15374 487 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 DAPK3O43293 454 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 BUB1BO60566 1050 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 ASGR2P07307 311 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 RPL17P18621 184 aaKnown RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 SCP2P22307 547 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 HPDP32754 393 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 CASP4P49662 377 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 CYP2J2P51589 502 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 GTF2A1P52655 376 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 RNASE9P60153 205 aaKnown RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 CREMQ03060 361 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 C6orf118Q5T5N4 469 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 PRSS55Q6UWB4 352 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 C15orf39Q6ZRI6 1047 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 SYDE1Q6ZW31 735 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 ENOSF1Q7L5Y1 443 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 DAW1Q8N136 415 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 SH2D3CQ8N5H7 860 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 LNX1Q8TBB1 728 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 TATDN2Q93075 761 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 ACSF2Q96CM8 615 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 PLCD4Q9BRC7 762 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 TCHPQ9BT92 498 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 AP1M1Q9BXS5 423 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 MRPL4Q9BYD3 311 aaKnown RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 CXCL16Q9H2A7 254 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 ST6GALNAC4Q9H4F1 302 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 C17orf75Q9HAS0 396 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 RXFP1Q9HBX9 757 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 CTTNBP2NLQ9P2B4 639 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 UVRAGQ9P2Y5 699 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 LIMD1Q9UGP4 676 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 SORCS3Q9UPU3 1222 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 TNFSF13BQ9Y275 285 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 USTQ9Y2C2 406 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 ZSCAN5CA6NGD5 496 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 TTI1O43156 1089 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 TGM5O43548 720 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 TRAPPC3O43617 180 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 RFPL2O75678 378 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 AGTP01019 485 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 HARSP12081 509 aaKnown RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 NMT1P30419 496 aaKnown RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 RDXP35241 583 aaKnown RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 FNTAP49354 379 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 LIG3P49916 1009 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 VAMP7P51809 220 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 PMS2P54278 862 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 YARSP54577 528 aaKnown RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 MFAP3P55082 362 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 OSTNP61366 133 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 GUCY1A3Q02108 690 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 CAV1Q03135 178 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 STRN3Q13033 797 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 CALCOCO2Q13137 446 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 MAPK7Q13164 816 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 RTP2Q5QGT7 225 aa9.5□□□□□ -0.89
COL12A1-208ENST00000486533 RNF187Q5TA31 235 aaPredicted RBP9.5□□□□□ -0.89
COL12A1-208ENST00000486533 FAM171A1Q5VUB5 890 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms