RNA–Protein interactions for RNA: ENST00000486516.5

COMMD6-211, Transcript of COMM domain containing 6, humanhuman

TSL 5

Gene COMMD6, Length 374 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-211ENST00000486516 MAFAQ8NHW3 353 aaPredicted RBP2.74□□□□□ -1.97
COMMD6-211ENST00000486516 HDAC10Q969S8 669 aa2.74□□□□□ -1.97
COMMD6-211ENST00000486516 TTC1Q99614 292 aa2.74□□□□□ -1.97
COMMD6-211ENST00000486516 RBM38Q9H0Z9 239 aaKnown RBP2.74□□□□□ -1.97
COMMD6-211ENST00000486516 DECR2Q9NUI1 292 aa2.74□□□□□ -1.97
COMMD6-211ENST00000486516 KCNG2Q9UJ96 466 aa2.74□□□□□ -1.97
COMMD6-211ENST00000486516 TUBD1Q9UJT1 453 aa2.74□□□□□ -1.97
COMMD6-211ENST00000486516 PCDHA12Q9UN75 941 aa2.74□□□□□ -1.97
COMMD6-211ENST00000486516 A0A087X0B3 334 aa2.73□□□□□ -1.97
COMMD6-211ENST00000486516 PRR23AA6NEV1 266 aa2.73□□□□□ -1.97
COMMD6-211ENST00000486516 LRRC14BA6NHZ5 514 aa2.73□□□□□ -1.97
COMMD6-211ENST00000486516 TBX6O95947 436 aaPredicted RBP2.73□□□□□ -1.97
COMMD6-211ENST00000486516 ALDH7A1P49419 539 aaKnown RBP2.73□□□□□ -1.97
COMMD6-211ENST00000486516 E2F2Q14209 437 aa2.73□□□□□ -1.97
COMMD6-211ENST00000486516 SLC4A8Q2Y0W8 1093 aa2.73□□□□□ -1.97
COMMD6-211ENST00000486516 LONRF3Q496Y0 759 aa2.73□□□□□ -1.97
COMMD6-211ENST00000486516 PRAMEF19Q5SWL8 479 aa2.73□□□□□ -1.97
COMMD6-211ENST00000486516 SIRT6Q8N6T7 355 aa2.73□□□□□ -1.97
COMMD6-211ENST00000486516 ABCF1Q8NE71 845 aaKnown RBP eCLIP2.73□□□□□ -1.97
COMMD6-211ENST00000486516 UBXN4Q92575 508 aa2.73□□□□□ -1.97
COMMD6-211ENST00000486516 C6orf106Q9H6K1 298 aaPredicted RBP2.73□□□□□ -1.97
COMMD6-211ENST00000486516 MAGED2Q9UNF1 606 aaPredicted RBP2.73□□□□□ -1.97
COMMD6-211ENST00000486516 APOBEC2Q9Y235 224 aaKnown RBP2.73□□□□□ -1.97
COMMD6-211ENST00000486516 IPPQ9Y573 584 aa2.73□□□□□ -1.97
COMMD6-211ENST00000486516 CADPSQ9ULU8 1353 aa2.73□□□□□ -1.97
COMMD6-211ENST00000486516 C2CD4BA6NLJ0 364 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 HTRA2O43464 458 aaPredicted RBP2.72□□□□□ -1.97
COMMD6-211ENST00000486516 LDLRP01130 860 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 ATXN1LP0C7T5 689 aaKnown RBP2.72□□□□□ -1.97
COMMD6-211ENST00000486516 PIM1P11309 404 aaPredicted RBP2.72□□□□□ -1.97
COMMD6-211ENST00000486516 PIK3CGP48736 1102 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 HSF1Q00613 529 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 EGR4Q05215 589 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 STRN3Q13033 797 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 SLC14A1Q13336 389 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 CC2D1BQ5T0F9 858 aaKnown RBP2.72□□□□□ -1.97
COMMD6-211ENST00000486516 SOGA3Q5TF21 947 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 C16orf86Q6ZW13 317 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 STRA8Q7Z7C7 330 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 LINC01465Q8N7H1 131 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 ELP5Q8TE02 316 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 OSCP1Q8WVF1 389 aa2.72□□□□□ -1.97
COMMD6-211ENST00000486516 MSI2Q96DH6 328 aaKnown RBP2.72□□□□□ -1.97
COMMD6-211ENST00000486516 SAP30BPQ9UHR5 308 aaKnown RBP2.72□□□□□ -1.97
COMMD6-211ENST00000486516 SIRT4Q9Y6E7 314 aaPredicted RBP2.72□□□□□ -1.97
COMMD6-211ENST00000486516 PDE8AO60658 829 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 PRDX5P30044 214 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 PDE6CP51160 858 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 RBM39Q14498 530 aaKnown RBP2.71□□□□□ -1.98
COMMD6-211ENST00000486516 KCNB1Q14721 858 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 SF3A1Q15459 793 aaKnown RBP2.71□□□□□ -1.98
COMMD6-211ENST00000486516 C4orf46Q504U0 113 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 EARS2Q5JPH6 523 aaKnown RBP2.71□□□□□ -1.98
COMMD6-211ENST00000486516 GIMAP6Q6P9H5 292 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 FAM90A1Q86YD7 464 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 TNPO1Q92973 898 aaKnown RBP2.71□□□□□ -1.98
COMMD6-211ENST00000486516 TRMT61AQ96FX7 289 aaKnown RBP2.71□□□□□ -1.98
COMMD6-211ENST00000486516 CHMP4AQ9BY43 222 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 EGLN1Q9GZT9 426 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 PIF1Q9H611 641 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 CXorf36Q9H7Y0 433 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 GNL3LQ9NVN8 582 aaKnown RBP2.71□□□□□ -1.98
COMMD6-211ENST00000486516 INSL5Q9Y5Q6 135 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 SNX14Q9Y5W7 946 aa2.71□□□□□ -1.98
COMMD6-211ENST00000486516 SNED1Q8TER0 1413 aa2.7□□□□□ -1.98
COMMD6-211ENST00000486516 CCDC154A6NI56 674 aa2.7□□□□□ -1.98
COMMD6-211ENST00000486516 SMTNL1A8MU46 457 aa2.7□□□□□ -1.98
COMMD6-211ENST00000486516 PPM1GO15355 546 aaPredicted RBP2.7□□□□□ -1.98
COMMD6-211ENST00000486516 TLX3O43711 291 aaPredicted RBP2.7□□□□□ -1.98
COMMD6-211ENST00000486516 PKMP14618 531 aaKnown RBP2.7□□□□□ -1.98
COMMD6-211ENST00000486516 DIO1P49895 249 aa2.7□□□□□ -1.98
COMMD6-211ENST00000486516 PDLIM4P50479 330 aa2.7□□□□□ -1.98
COMMD6-211ENST00000486516 IQCB1Q15051 598 aa2.7□□□□□ -1.98
COMMD6-211ENST00000486516 ZNF718Q3SXZ3 478 aa2.7□□□□□ -1.98
COMMD6-211ENST00000486516 MEX3BQ6ZN04 569 aaKnown RBP2.7□□□□□ -1.98
COMMD6-211ENST00000486516 LIN28BQ6ZN17 250 aaKnown RBP eCLIP2.7□□□□□ -1.98
COMMD6-211ENST00000486516 HOMER1Q86YM7 354 aa2.7□□□□□ -1.98
COMMD6-211ENST00000486516 C16orf71Q8IYS4 520 aaPredicted RBP2.7□□□□□ -1.98
COMMD6-211ENST00000486516 IZUMO1Q8IYV9 350 aa2.7□□□□□ -1.98
COMMD6-211ENST00000486516 ABRAQ8N0Z2 381 aa2.7□□□□□ -1.98
COMMD6-211ENST00000486516 NSUN6Q8TEA1 469 aaKnown RBP2.7□□□□□ -1.98
COMMD6-211ENST00000486516 AHCYL2Q96HN2 611 aaKnown RBP2.7□□□□□ -1.98
COMMD6-211ENST00000486516 INPP4AQ96PE3 977 aaPredicted RBP2.7□□□□□ -1.98
COMMD6-211ENST00000486516 SF3B5Q9BWJ5 86 aaKnown RBP2.7□□□□□ -1.98
COMMD6-211ENST00000486516 MLXIPLQ9NP71 852 aa2.7□□□□□ -1.98
COMMD6-211ENST00000486516 A0A0G2JK05 382 aa2.69□□□□□ -1.98
COMMD6-211ENST00000486516 H0YGN5 161 aa2.69□□□□□ -1.98
COMMD6-211ENST00000486516 NDUFS2O75306 463 aa2.69□□□□□ -1.98
COMMD6-211ENST00000486516 PMPCBO75439 489 aa2.69□□□□□ -1.98
COMMD6-211ENST00000486516 GNAI2P04899 355 aa2.69□□□□□ -1.98
COMMD6-211ENST00000486516 SP1P08047 785 aa2.69□□□□□ -1.98
COMMD6-211ENST00000486516 PHKG2P15735 406 aa2.69□□□□□ -1.98
COMMD6-211ENST00000486516 SMARCA1P28370 1054 aa2.69□□□□□ -1.98
COMMD6-211ENST00000486516 GKP32189 559 aa2.69□□□□□ -1.98
COMMD6-211ENST00000486516 NFE2L2Q16236 605 aa2.69□□□□□ -1.98
COMMD6-211ENST00000486516 MORC1Q86VD1 984 aa2.69□□□□□ -1.98
COMMD6-211ENST00000486516 ZNF280BQ86YH2 543 aa2.69□□□□□ -1.98
COMMD6-211ENST00000486516 MUC20Q8N307 709 aaPredicted RBP2.69□□□□□ -1.98
COMMD6-211ENST00000486516 CTCFLQ8NI51 663 aaPredicted RBP2.69□□□□□ -1.98
COMMD6-211ENST00000486516 MRFAP1L1Q96HT8 127 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms