RNA–Protein interactions for RNA: ENST00000485465.1

CHMP3-207, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 920 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-207ENST00000485465 ANKRD62A6NC57 917 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 NCK2O43639 380 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 PAPLNO95428 1278 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 ZBED1O96006 694 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 POU2F2P09086 479 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 USP17L7P0C7H9 530 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 SRGAP2BP0DMP2 458 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 MYBL1P10243 752 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 ABCB4P21439 1286 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 YWHAQP27348 245 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 IFRD2Q12894 506 aaPredicted RBP18.48■□□□□ 0.55
CHMP3-207ENST00000485465 TAF12Q16514 161 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 OR6B2Q6IFH4 312 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 FAM183BPQ6ZVS7 135 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 ZDHHC17Q8IUH5 632 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 SCML4Q8N228 414 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 MICALL1Q8N3F8 863 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 MYRFLQ96LU7 910 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 GUCD1Q96NT3 240 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 PRKD2Q9BZL6 878 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 SFXN1Q9H9B4 322 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 LUC7LQ9NQ29 371 aaKnown RBP18.48■□□□□ 0.55
CHMP3-207ENST00000485465 WDR35Q9P2L0 1181 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 INTUQ9ULD6 942 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 MAGED2Q9UNF1 606 aaPredicted RBP18.48■□□□□ 0.55
CHMP3-207ENST00000485465 SCML2Q9UQR0 700 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 ADGRG1Q9Y653 693 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 MTCL1Q9Y4B5 1905 aaKnown RBP18.48■□□□□ 0.55
CHMP3-207ENST00000485465 PATJQ8NI35 1801 aa18.48■□□□□ 0.55
CHMP3-207ENST00000485465 XYLBO75191 536 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 RRM1P23921 792 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 GSCP56915 257 aaPredicted RBP18.47■□□□□ 0.55
CHMP3-207ENST00000485465 DAOAP59103 153 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 GPC5P78333 572 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 MRPS5P82675 430 aaKnown RBP18.47■□□□□ 0.55
CHMP3-207ENST00000485465 SLC6A3Q01959 620 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 CTC1Q2NKJ3 1217 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 ANKRD54Q6NXT1 300 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 PHLDB2Q86SQ0 1253 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 C12orf76Q8N812 135 aaPredicted RBP18.47■□□□□ 0.55
CHMP3-207ENST00000485465 CMASQ8NFW8 434 aaPredicted RBP18.47■□□□□ 0.55
CHMP3-207ENST00000485465 CLEC4CQ8WTT0 213 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 IRGQQ8WZA9 623 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 NDRG1Q92597 394 aaKnown RBP18.47■□□□□ 0.55
CHMP3-207ENST00000485465 FBXO32Q969P5 355 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 ZNF707Q96C28 371 aaPredicted RBP18.47■□□□□ 0.55
CHMP3-207ENST00000485465 ZNF653Q96CK0 615 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 MCRS1Q96EZ8 462 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 TRMT2BQ96GJ1 504 aaKnown RBP18.47■□□□□ 0.55
CHMP3-207ENST00000485465 THAP2Q9H0W7 228 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 CNOT8Q9UFF9 292 aaKnown RBP18.47■□□□□ 0.55
CHMP3-207ENST00000485465 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.47■□□□□ 0.55
CHMP3-207ENST00000485465 MYH10P35580 1976 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 NCANO14594 1321 aa18.47■□□□□ 0.55
CHMP3-207ENST00000485465 GOLGA8SH3BPF8 625 aa18.46■□□□□ 0.55
CHMP3-207ENST00000485465 TMEM253P0C7T8 217 aa18.46■□□□□ 0.55
CHMP3-207ENST00000485465 TAF10Q12962 218 aa18.46■□□□□ 0.55
CHMP3-207ENST00000485465 COL19A1Q14993 1142 aa18.46■□□□□ 0.55
CHMP3-207ENST00000485465 OLFML1Q6UWY5 402 aa18.46■□□□□ 0.55
CHMP3-207ENST00000485465 BHLHA9Q7RTU4 235 aa18.46■□□□□ 0.55
CHMP3-207ENST00000485465 CTNNBL1Q8WYA6 563 aaPredicted RBP18.46■□□□□ 0.55
CHMP3-207ENST00000485465 AVENQ9NQS1 362 aaPredicted RBP18.46■□□□□ 0.55
CHMP3-207ENST00000485465 MTMR10Q9NXD2 777 aa18.46■□□□□ 0.55
CHMP3-207ENST00000485465 UXTQ9UBK9 157 aaPredicted RBP18.46■□□□□ 0.55
CHMP3-207ENST00000485465 CDH23Q9H251 3354 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 TCRBV5S1A1TA0A578 114 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 SART1O43290 800 aaKnown RBP18.45■□□□□ 0.54
CHMP3-207ENST00000485465 ATMINO43313 823 aaPredicted RBP18.45■□□□□ 0.54
CHMP3-207ENST00000485465 CYP1A2P05177 515 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 PTPN2P17706 415 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 SCNN1AP37088 669 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 VAV2P52735 878 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 EFHC1Q5JVL4 640 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 PLEKHA7Q6IQ23 1121 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 DNAJC24Q6P3W2 148 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 KIAA1328Q86T90 577 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 MON1AQ86VX9 555 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 TMC8Q8IU68 726 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 HS6ST3Q8IZP7 471 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 C3orf20Q8ND61 904 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 ARHGEF26Q96DR7 871 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 PIWIL1Q96J94 861 aaKnown RBP18.45■□□□□ 0.54
CHMP3-207ENST00000485465 SLITRK1Q96PX8 696 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 CORO1BQ9BR76 489 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 LRRC3Q9BY71 257 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 ZNF334Q9HCZ1 680 aaPredicted RBP18.45■□□□□ 0.54
CHMP3-207ENST00000485465 PARVAQ9NVD7 372 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 CLDND1Q9NY35 253 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 GMIPQ9P107 970 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 CLEC1BQ9P126 229 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 DNMT3BQ9UBC3 853 aaKnown RBP18.45■□□□□ 0.54
CHMP3-207ENST00000485465 MYO1AQ9UBC5 1043 aa18.45■□□□□ 0.54
CHMP3-207ENST00000485465 CHORDC1Q9UHD1 332 aaPredicted RBP18.45■□□□□ 0.54
CHMP3-207ENST00000485465 MYO9BQ13459 2157 aa18.44■□□□□ 0.54
CHMP3-207ENST00000485465 YJEFN3A6XGL0 299 aa18.44■□□□□ 0.54
CHMP3-207ENST00000485465 E7ENQ6 273 aa18.44■□□□□ 0.54
CHMP3-207ENST00000485465 GLI1P08151 1106 aa18.44■□□□□ 0.54
CHMP3-207ENST00000485465 CCDC175P0C221 793 aa18.44■□□□□ 0.54
CHMP3-207ENST00000485465 FOSL2P15408 326 aa18.44■□□□□ 0.54
CHMP3-207ENST00000485465 HOXB8P17481 243 aaPredicted RBP18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms