RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 SOBPA7XYQ1 873 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 O00370 1275 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 COCHO43405 550 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 OAS1P00973 400 aaKnown RBP17.12■□□□□ 0.33
DDR1-246ENST00000485023 DCNP07585 359 aaKnown RBP17.12■□□□□ 0.33
DDR1-246ENST00000485023 PAEPP09466 180 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 ARSAP15289 507 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 EEF1GP26641 437 aaKnown RBP17.12■□□□□ 0.33
DDR1-246ENST00000485023 PON1P27169 355 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 USP8P40818 1118 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 PDE6CP51160 858 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 CLCN5P51795 746 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 BCAT1P54687 386 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 SLC8A3P57103 927 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 STARD6P59095 220 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 MYL5Q02045 173 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 PRKCQQ04759 706 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 USP4Q13107 963 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 ZNF268Q14587 947 aaPredicted RBP17.12■□□□□ 0.33
DDR1-246ENST00000485023 ANO6Q4KMQ2 910 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 AOPEPQ8N6M6 819 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 ANKRD52Q8NB46 1076 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 OVCA2Q8WZ82 227 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 ZSWIM1Q9BR11 485 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 NACA2Q9H009 215 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 VPS16Q9H269 839 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 EBF3Q9H4W6 596 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 GKN1Q9NS71 199 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 COMMD8Q9NX08 183 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 NDRG2Q9UN36 371 aaKnown RBP17.12■□□□□ 0.33
DDR1-246ENST00000485023 ARHGAP26Q9UNA1 814 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 MTF2Q9Y483 593 aaPredicted RBP17.12■□□□□ 0.33
DDR1-246ENST00000485023 WNT6Q9Y6F9 365 aa17.12■□□□□ 0.33
DDR1-246ENST00000485023 A0A1W2PQH9 124 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 KANSL1LA0AUZ9 987 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 FAM92AA1XBS5 289 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 GTPBP10A4D1E9 387 aaKnown RBP17.11■□□□□ 0.33
DDR1-246ENST00000485023 M0QYV0 167 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 LEFTY2O00292 366 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 PIK3R2O00459 728 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 IRF1P10914 325 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 KIF11P52732 1056 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 ZNF132P52740 706 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 MFAP3P55082 362 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 ZXDBP98169 803 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 KRT31Q15323 416 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 HECTD3Q5T447 861 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 CDKAL1Q5VV42 579 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 PJA1Q8NG27 643 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 NMUR1Q9HB89 426 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 PNPLA8Q9NP80 782 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 SIX2Q9NPC8 291 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 ACP6Q9NPH0 428 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 TLR8Q9NR97 1041 aaKnown RBP17.11■□□□□ 0.33
DDR1-246ENST00000485023 OSER1Q9NX31 292 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 NAGPAQ9UK23 515 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 NUDT5Q9UKK9 219 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 SCML2Q9UQR0 700 aa17.11■□□□□ 0.33
DDR1-246ENST00000485023 MDM4O15151 490 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 TLR5O60602 858 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 OLFM2O95897 454 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 ZDHHC11BP0C7U3 371 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 PNMA6AP0CW24 399 aaPredicted RBP17.1■□□□□ 0.33
DDR1-246ENST00000485023 TARSP26639 723 aaKnown RBP17.1■□□□□ 0.33
DDR1-246ENST00000485023 IFNAR2P48551 515 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 RGS7P49802 495 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 TKTL1P51854 596 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 SLC7A9P82251 487 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 PLCB2Q00722 1185 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 BST2Q10589 180 aaKnown RBP17.1■□□□□ 0.33
DDR1-246ENST00000485023 CCDC105Q8IYK2 499 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 SECISBP2LQ93073 1101 aaKnown RBP17.1■□□□□ 0.33
DDR1-246ENST00000485023 DDX23Q9BUQ8 820 aaKnown RBP17.1■□□□□ 0.33
DDR1-246ENST00000485023 LSM14BQ9BX40 385 aaKnown RBP17.1■□□□□ 0.33
DDR1-246ENST00000485023 LTB4R2Q9NPC1 389 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 TRPV5Q9NQA5 729 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 HPS4Q9NQG7 708 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 DUS2Q9NX74 493 aaKnown RBP17.1■□□□□ 0.33
DDR1-246ENST00000485023 CFAP97Q9P2B7 532 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 DNAJC12Q9UKB3 198 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 KIAA1257Q9ULG3 409 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.1■□□□□ 0.33
DDR1-246ENST00000485023 SIT1Q9Y3P8 196 aa17.1■□□□□ 0.33
DDR1-246ENST00000485023 ANAPC1Q9H1A4 1944 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 ZNF638Q14966 1978 aaKnown RBP17.09■□□□□ 0.33
DDR1-246ENST00000485023 SYCE3A1L190 88 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 SHISA7A6NL88 538 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 FAM170BA6NMN3 283 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 SPECC1L-ADORA2AF8WAN1 911 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 XPO1O14980 1071 aaKnown RBP17.09■□□□□ 0.33
DDR1-246ENST00000485023 LETM1O95202 739 aaPredicted RBP17.09■□□□□ 0.33
DDR1-246ENST00000485023 TBX18O95935 607 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 ADIGQ0VDE8 80 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 KLHL40Q2TBA0 621 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 LCLAT1Q6UWP7 414 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 ZNF852Q6ZMS4 543 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 ENOSF1Q7L5Y1 443 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 PRSS33Q8NF86 280 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 FAM3CQ92520 227 aa17.09■□□□□ 0.33
DDR1-246ENST00000485023 NDRG1Q92597 394 aaKnown RBP17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms