RNA–Protein interactions for RNA: ENST00000484112.5

CPSF4-213, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 2

Gene CPSF4, Length 825 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-213ENST00000484112 RIN3Q8TB24 985 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 NELFBQ8WX92 580 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 EXOC4Q96A65 974 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 FUBP3Q96I24 572 aaKnown RBP eCLIP10.64□□□□□ -0.71
CPSF4-213ENST00000484112 TMLHEQ9NVH6 421 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 DUS2Q9NX74 493 aaKnown RBP10.64□□□□□ -0.71
CPSF4-213ENST00000484112 RWDD2AQ9UIY3 292 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 ZMYM5Q9UJ78 669 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 CDH9Q9ULB4 789 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 PCDHB5Q9Y5E4 795 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 GREB1Q4ZG55 1949 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 ATG2BQ96BY7 2078 aa10.64□□□□□ -0.71
CPSF4-213ENST00000484112 NUP210Q8TEM1 1887 aaPredicted RBP10.64□□□□□ -0.71
CPSF4-213ENST00000484112 BIN1O00499 593 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 P4HA2O15460 535 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 APBB3O95704 486 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 ASS1P00966 412 aaKnown RBP10.63□□□□□ -0.71
CPSF4-213ENST00000484112 CD44P16070 742 aaKnown RBP10.63□□□□□ -0.71
CPSF4-213ENST00000484112 SPINK2P20155 84 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 ERCC5P28715 1186 aaPredicted RBP10.63□□□□□ -0.71
CPSF4-213ENST00000484112 IFNAR2P48551 515 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 MXI1P50539 228 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 PMS1P54277 932 aaKnown RBP10.63□□□□□ -0.71
CPSF4-213ENST00000484112 MYL6P60660 151 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 CETN1Q12798 172 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 MTF1Q14872 753 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 PDGFRLQ15198 375 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 DDR2Q16832 855 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 CFAP221Q4G0U5 840 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 FBXO43Q4G163 708 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 DAB2IPQ5VWQ8 1189 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 SMYD5Q6GMV2 418 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 FAM171BQ6P995 826 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 C4orf50Q6ZRC1 276 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 RBM43Q6ZSC3 357 aaKnown RBP10.63□□□□□ -0.71
CPSF4-213ENST00000484112 SYT13Q7L8C5 426 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 MON1AQ86VX9 555 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 UNC93AQ86WB7 457 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 TTC30AQ86WT1 665 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 CPA6Q8N4T0 437 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 KBTBD7Q8WVZ9 684 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 CD101Q93033 1021 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 CYP2S1Q96SQ9 504 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 MMS19Q96T76 1030 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 TPSD1Q9BZJ3 242 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 ECT2Q9H8V3 914 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 KIF9Q9HAQ2 790 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 CYP3A43Q9HB55 503 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 ZMIZ1Q9ULJ6 1067 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 COQ4Q9Y3A0 265 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 WNT6Q9Y6F9 365 aa10.63□□□□□ -0.71
CPSF4-213ENST00000484112 BCLAF3A2AJT9 711 aaKnown RBP10.62□□□□□ -0.71
CPSF4-213ENST00000484112 TRIM49BA6NDI0 452 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 KHNYNO15037 678 aaKnown RBP10.62□□□□□ -0.71
CPSF4-213ENST00000484112 VNN1O95497 513 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 CSH1P0DML2 217 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 CSH2P0DML3 217 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 ACAT1P24752 427 aaKnown RBP10.62□□□□□ -0.71
CPSF4-213ENST00000484112 GNL1P36915 607 aaPredicted RBP10.62□□□□□ -0.71
CPSF4-213ENST00000484112 PIK3CAP42336 1068 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 MAGEA11P43364 429 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 SEC13P55735 322 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 PPP3CAQ08209 521 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 ZNF252P-AS1Q0IIN9 211 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 UAP1L1Q3KQV9 507 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 SH3PXD2AQ5TCZ1 1133 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 ISM2Q6H9L7 571 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 KLHL10Q6JEL2 608 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 UNQ6494/PRO21346Q6UXR6 183 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 FBXL13Q8NEE6 735 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 TSTD1Q8NFU3 115 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 SLC35C1Q96A29 364 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 ACDQ96AP0 544 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 TNIP3Q96KP6 325 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 PKMYT1Q99640 499 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 DUSP9Q99956 384 aaKnown RBP10.62□□□□□ -0.71
CPSF4-213ENST00000484112 SNX25Q9H3E2 840 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 CTNND2Q9UQB3 1225 aa10.62□□□□□ -0.71
CPSF4-213ENST00000484112 TRAV19A0A0A6YYK7 116 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 SOBPA7XYQ1 873 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 TOP3BO95985 862 aaKnown RBP10.61□□□□□ -0.71
CPSF4-213ENST00000484112 HLA-DRAP01903 254 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 CKMP06732 381 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 USP17L7P0C7H9 530 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 TRIM49P0CI25 452 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 TRIM49CP0CI26 452 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 CYP2F1P24903 491 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 GCLMP48507 274 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 RPL10AP62906 217 aaKnown RBP10.61□□□□□ -0.71
CPSF4-213ENST00000484112 NR1H3Q13133 447 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 ZNF268Q14587 947 aaPredicted RBP10.61□□□□□ -0.71
CPSF4-213ENST00000484112 CCDC40Q4G0X9 1142 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 USP39Q53GS9 565 aaKnown RBP10.61□□□□□ -0.71
CPSF4-213ENST00000484112 C2orf27AQ580R0 203 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 VSTM1Q6UX27 236 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 FAM114A1Q8IWE2 563 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 SCN4BQ8IWT1 228 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 ARL14EPQ8N8R7 260 aaPredicted RBP10.61□□□□□ -0.71
CPSF4-213ENST00000484112 MYCBPAPQ8TBZ2 947 aa10.61□□□□□ -0.71
CPSF4-213ENST00000484112 GPT2Q8TD30 523 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms