RNA–Protein interactions for RNA: ENST00000483417.1

HMG20B-210, Transcript of high mobility group 20B, humanhuman

TSL 3

Gene HMG20B, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-210ENST00000483417 ZNF263O14978 683 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 CHADO15335 359 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 TPM2P07951 284 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 KRT5P13647 590 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 RFX1P22670 979 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 TBXAS1P24557 533 aaPredicted RBP10.17□□□□□ -0.78
HMG20B-210ENST00000483417 BRD2P25440 801 aaKnown RBP10.17□□□□□ -0.78
HMG20B-210ENST00000483417 PCSK1P29120 753 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 ADORA2BP29275 332 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 MAGEA9P43362 315 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 RPS9P46781 194 aaKnown RBP10.17□□□□□ -0.78
HMG20B-210ENST00000483417 JAM2P57087 298 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 TSPY1Q01534 308 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 UBXN2BQ14CS0 331 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 CFAP221Q4G0U5 840 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 GPR158Q5T848 1215 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 E4F1Q66K89 784 aaPredicted RBP10.17□□□□□ -0.78
HMG20B-210ENST00000483417 SLC47A2Q86VL8 602 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 FAM71AQ8IYT1 594 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 WDTC1Q8N5D0 677 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 RBBP8NLQ8NC74 664 aaPredicted RBP10.17□□□□□ -0.78
HMG20B-210ENST00000483417 ZMIZ2Q8NF64 920 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 UBA3Q8TBC4 463 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 SLC2A14Q8TDB8 520 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 BAP1Q92560 729 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 NKD2Q969F2 451 aaPredicted RBP10.17□□□□□ -0.78
HMG20B-210ENST00000483417 SMOQ99835 787 aa10.17□□□□□ -0.78
HMG20B-210ENST00000483417 A0A1W2PQC6 194 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 MAN2B1O00754 1011 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 GFPT2O94808 682 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 PRAMEF12O95522 483 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 CHRNB1P11230 501 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 CD19P15391 556 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 CDC25CP30307 473 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 MAGEA11P43364 429 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 PGFP49763 221 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 ZNF75DP51815 510 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 CYP4F8P98187 520 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 VEPH1Q14D04 833 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 ZNF528Q3MIS6 628 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 DENND1BQ6P3S1 775 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 SARM1Q6SZW1 724 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 IRF2BP2Q7Z5L9 587 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 MON1AQ86VX9 555 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 TTC30AQ86WT1 665 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 SPATA2LQ8IUW3 424 aaPredicted RBP10.16□□□□□ -0.78
HMG20B-210ENST00000483417 SCN4BQ8IWT1 228 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 NEK11Q8NG66 645 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 ZNF606Q8WXB4 792 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 FAM3CQ92520 227 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 TRMT2BQ96GJ1 504 aaKnown RBP10.16□□□□□ -0.78
HMG20B-210ENST00000483417 FUBP3Q96I24 572 aaKnown RBP eCLIP10.16□□□□□ -0.78
HMG20B-210ENST00000483417 HNRNPABQ99729 332 aaKnown RBP10.16□□□□□ -0.78
HMG20B-210ENST00000483417 ANP32EQ9BTT0 268 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 MED10Q9BTT4 135 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 TRIM5Q9C035 493 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 TTYH3Q9C0H2 523 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 SEMA4AQ9H3S1 761 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 FBXO4Q9UKT5 387 aa10.16□□□□□ -0.78
HMG20B-210ENST00000483417 MRPS17Q9Y2R5 130 aaKnown RBP10.16□□□□□ -0.78
HMG20B-210ENST00000483417 SLC38A8A6NNN8 435 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 HHLA1C9JL84 531 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 F8VP50 259 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 NCAM2O15394 837 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 TADA3O75528 432 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 CSH1P0DML2 217 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 CSH2P0DML3 217 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 VDRP11473 427 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 SKILP12757 684 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 CHRNB2P17787 502 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 GRIK1P39086 918 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 MAP3K7CLP57077 242 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 USP46P62068 366 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 RPL10AP62906 217 aaKnown RBP10.15□□□□□ -0.78
HMG20B-210ENST00000483417 ARID5AQ03989 594 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 GAS6Q14393 721 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 CNGA2Q16280 664 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 ARHGAP29Q52LW3 1261 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 ARHGAP15Q53QZ3 475 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 NOP9Q86U38 636 aaKnown RBP10.15□□□□□ -0.78
HMG20B-210ENST00000483417 VSTM4Q8IW00 320 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 CMTM8Q8IZV2 173 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 CELF5Q8N6W0 485 aaKnown RBP10.15□□□□□ -0.78
HMG20B-210ENST00000483417 SCAMP5Q8TAC9 235 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 RIN3Q8TB24 985 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 BPIFB1Q8TDL5 484 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 SLC20A1Q8WUM9 679 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 DDX1Q92499 740 aaKnown RBP10.15□□□□□ -0.78
HMG20B-210ENST00000483417 NDRG1Q92597 394 aaKnown RBP10.15□□□□□ -0.78
HMG20B-210ENST00000483417 USP13Q92995 863 aaPredicted RBP10.15□□□□□ -0.78
HMG20B-210ENST00000483417 JAKMIP2Q96AA8 810 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 ZFYVE19Q96K21 471 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 TNIP3Q96KP6 325 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 FAM83CQ9BQN1 747 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 SMG9Q9H0W8 520 aaKnown RBP10.15□□□□□ -0.78
HMG20B-210ENST00000483417 CHRDQ9H2X0 955 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 SLITRK6Q9H5Y7 841 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 LMAN1LQ9HAT1 526 aa10.15□□□□□ -0.78
HMG20B-210ENST00000483417 SPATA6Q9NWH7 488 aaPredicted RBP10.15□□□□□ -0.78
HMG20B-210ENST00000483417 CYTH4Q9UIA0 394 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms