RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 PPM1KQ8N3J5 372 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 CPA6Q8N4T0 437 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 OVCA2Q8WZ82 227 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 NT5C1BQ96P26 610 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 GBP4Q96PP9 640 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 DUSP16Q9BY84 665 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 LINC00597Q9H2U6 94 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 CCSER2Q9H7U1 834 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 RBM12Q9NTZ6 932 aaKnown RBP17.5■□□□□ 0.39
VAMP4-204ENST00000482519 LMBRD1Q9NUN5 540 aa17.5■□□□□ 0.39
VAMP4-204ENST00000482519 CYP26A1O43174 497 aa17.49■□□□□ 0.39
VAMP4-204ENST00000482519 COCHO43405 550 aa17.49■□□□□ 0.39
VAMP4-204ENST00000482519 AFPP02771 609 aaKnown RBP17.49■□□□□ 0.39
VAMP4-204ENST00000482519 CD19P15391 556 aa17.49■□□□□ 0.39
VAMP4-204ENST00000482519 TBXAS1P24557 533 aaPredicted RBP17.49■□□□□ 0.39
VAMP4-204ENST00000482519 SLC7A9P82251 487 aa17.49■□□□□ 0.39
VAMP4-204ENST00000482519 ZXDBP98169 803 aa17.49■□□□□ 0.39
VAMP4-204ENST00000482519 CSTF1Q05048 431 aaKnown RBP17.49■□□□□ 0.39
VAMP4-204ENST00000482519 LRRC32Q14392 662 aa17.49■□□□□ 0.39
VAMP4-204ENST00000482519 TPD52L1Q16890 204 aaPredicted RBP17.49■□□□□ 0.39
VAMP4-204ENST00000482519 CLEC17AQ6ZS10 378 aa17.49■□□□□ 0.39
VAMP4-204ENST00000482519 TRIM59Q8IWR1 403 aa17.49■□□□□ 0.39
VAMP4-204ENST00000482519 MLKLQ8NB16 471 aa17.49■□□□□ 0.39
VAMP4-204ENST00000482519 ATP2A3Q93084 1043 aa17.49■□□□□ 0.39
VAMP4-204ENST00000482519 TLR8Q9NR97 1041 aaKnown RBP17.49■□□□□ 0.39
VAMP4-204ENST00000482519 IL37Q9NZH6 218 aa17.49■□□□□ 0.39
VAMP4-204ENST00000482519 CFAP97Q9P2B7 532 aa17.49■□□□□ 0.39
VAMP4-204ENST00000482519 MYO16Q9Y6X6 1858 aa17.48■□□□□ 0.39
VAMP4-204ENST00000482519 HHLA1C9JL84 531 aa17.48■□□□□ 0.39
VAMP4-204ENST00000482519 SP9P0CG40 484 aa17.48■□□□□ 0.39
VAMP4-204ENST00000482519 CHRNB1P11230 501 aa17.48■□□□□ 0.39
VAMP4-204ENST00000482519 HOXD11P31277 338 aaPredicted RBP17.48■□□□□ 0.39
VAMP4-204ENST00000482519 PGFP49763 221 aa17.48■□□□□ 0.39
VAMP4-204ENST00000482519 AMPD2Q01433 879 aa17.48■□□□□ 0.39
VAMP4-204ENST00000482519 GOLGA7BQ2TAP0 167 aa17.48■□□□□ 0.39
VAMP4-204ENST00000482519 TSSK4Q6SA08 328 aa17.48■□□□□ 0.39
VAMP4-204ENST00000482519 RRAGAQ7L523 313 aa17.48■□□□□ 0.39
VAMP4-204ENST00000482519 MAML2Q8IZL2 1156 aaPredicted RBP17.48■□□□□ 0.39
VAMP4-204ENST00000482519 IPO9Q96P70 1041 aaKnown RBP17.48■□□□□ 0.39
VAMP4-204ENST00000482519 FAM124BQ9H5Z6 455 aaPredicted RBP17.48■□□□□ 0.39
VAMP4-204ENST00000482519 ECT2Q9H8V3 914 aa17.48■□□□□ 0.39
VAMP4-204ENST00000482519 PCDHB4Q9Y5E5 795 aa17.48■□□□□ 0.39
VAMP4-204ENST00000482519 R4GN57 208 aa17.48■□□□□ 0.39
VAMP4-204ENST00000482519 ZFHX2Q9C0A1 2572 aaPredicted RBP17.47■□□□□ 0.39
VAMP4-204ENST00000482519 PATJQ8NI35 1801 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 FAM92AA1XBS5 289 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 PMM2O15305 246 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 P4HA2O15460 535 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 OLFM2O95897 454 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 IRF1P10914 325 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 SLC8A3P57103 927 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 NR1H3Q13133 447 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 EML3Q32P44 896 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 DPCR1Q3MIW9 517 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 SGO2Q562F6 1265 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 SNX30Q5VWJ9 437 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 TMEM270Q6UE05 265 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 EHBP1Q8NDI1 1231 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 KAT5Q92993 513 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 CNOT6LQ96LI5 555 aaKnown RBP17.47■□□□□ 0.39
VAMP4-204ENST00000482519 MED15Q96RN5 788 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 CHRDQ9H2X0 955 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 SCML2Q9UQR0 700 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 PIEZO1Q92508 2521 aa17.47■□□□□ 0.39
VAMP4-204ENST00000482519 TLR5O60602 858 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 NFATC1O95644 943 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 TBX18O95935 607 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 ZDHHC11BP0C7U3 371 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 TCF3P15923 654 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 GJA4P35212 333 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 NBL1P41271 181 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 TUBP50607 506 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 MARSP56192 900 aaKnown RBP17.46■□□□□ 0.39
VAMP4-204ENST00000482519 GRSF1Q12849 480 aaKnown RBP eCLIP17.46■□□□□ 0.39
VAMP4-204ENST00000482519 DGKKQ5KSL6 1271 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 ARHGAP17Q68EM7 881 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 Q6ZS52 159 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 DDX42Q86XP3 938 aaKnown RBP eCLIP17.46■□□□□ 0.39
VAMP4-204ENST00000482519 ARHGEF19Q8IW93 802 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 ANKRD52Q8NB46 1076 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 LMO3Q8TAP4 145 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 INTS2Q9H0H0 1204 aaKnown RBP17.46■□□□□ 0.39
VAMP4-204ENST00000482519 PNPLA8Q9NP80 782 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 HESX1Q9UBX0 185 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 NAGPAQ9UK23 515 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 SH3BP1Q9Y3L3 701 aa17.46■□□□□ 0.39
VAMP4-204ENST00000482519 A0A1W2PQH9 124 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 GOLGA6L22H0YM25 854 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 MTIF2P46199 727 aaKnown RBP17.45■□□□□ 0.38
VAMP4-204ENST00000482519 GALK1P51570 392 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 KIF11P52732 1056 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 NAIF1Q69YI7 327 aaPredicted RBP17.45■□□□□ 0.38
VAMP4-204ENST00000482519 PIGZQ86VD9 579 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 UBR7Q8N806 425 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 UBA3Q8TBC4 463 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 NKD2Q969F2 451 aaPredicted RBP17.45■□□□□ 0.38
VAMP4-204ENST00000482519 CHFRQ96EP1 664 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 P2RY13Q9BPV8 354 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 CRACR2AQ9BSW2 395 aa17.45■□□□□ 0.38
VAMP4-204ENST00000482519 OSER1Q9NX31 292 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms