RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 LANCL2Q9NS86 450 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 CPSF2Q9P2I0 782 aaKnown RBP4.5□□□□□ -1.69
VPS41-212ENST00000482217 ZNF624Q9P2J8 865 aaPredicted RBP4.5□□□□□ -1.69
VPS41-212ENST00000482217 TRIM17Q9Y577 477 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 ANGPTL3Q9Y5C1 460 aa4.5□□□□□ -1.69
VPS41-212ENST00000482217 CCDC196A0A1B0GTZ2 297 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 hCG_1807616A0A1W2PRN6 198 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 LGALS16A8MUM7 142 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 MATN2O00339 956 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 LAMTOR5O43504 91 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 PRICKLE3O43900 615 aaPredicted RBP4.49□□□□□ -1.69
VPS41-212ENST00000482217 FMO6PO60774 539 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 ERAL1O75616 437 aaKnown RBP4.49□□□□□ -1.69
VPS41-212ENST00000482217 FGF18O76093 207 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 RTN3O95197 1032 aaPredicted RBP4.49□□□□□ -1.69
VPS41-212ENST00000482217 MLYCDO95822 493 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 HSPA5P11021 654 aaKnown RBP4.49□□□□□ -1.69
VPS41-212ENST00000482217 CYP2A6P11509 494 aaPredicted RBP4.49□□□□□ -1.69
VPS41-212ENST00000482217 CCNCP24863 283 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 ATP5DP30049 168 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 ACSL1P33121 698 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 CNR2P34972 360 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 SREBF1P36956 1147 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 IL12RB1P42701 662 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 SLC6A9P48067 706 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 ALDH9A1P49189 494 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 ALDH3A2P51648 485 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 NPEPPSP55786 919 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 TGFB2P61812 414 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 RIN1Q13671 783 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 NAA25Q14CX7 972 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 OASLQ15646 514 aaKnown RBP4.49□□□□□ -1.69
VPS41-212ENST00000482217 ZNF674Q2M3X9 581 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 ZACNQ401N2 412 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 C1orf141Q5JVX7 400 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 FBXO47Q5MNV8 452 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 SLC9C2Q5TAH2 1124 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 DENND5BQ6ZUT9 1274 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 B4GALNT4Q76KP1 1039 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 ZNF804AQ7Z570 1209 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 ADGRE4PQ86SQ3 457 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 RHOT1Q8IXI2 618 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 PQLC1Q8N2U9 271 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 GALNT15Q8N3T1 639 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 RNF152Q8N8N0 203 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 DRAXINQ8NBI3 349 aaPredicted RBP4.49□□□□□ -1.69
VPS41-212ENST00000482217 ZBTB44Q8NCP5 570 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 SHCBP1Q8NEM2 672 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 TOR1AIP2Q8NFQ8 470 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 CASKIN2Q8WXE0 1202 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 SEPT1Q8WYJ6 367 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 RFFLQ8WZ73 363 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 MAML1Q92585 1016 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 CHFRQ96EP1 664 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 C7orf26Q96N11 449 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 LMF1Q96S06 567 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 BDH2Q9BUT1 245 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 ACAT2Q9BWD1 397 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 JMJD4Q9H9V9 463 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 PREBQ9HCU5 417 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 IL23AQ9NPF7 189 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 KRT84Q9NSB2 600 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 TDP1Q9NUW8 608 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 OAZ3Q9UMX2 235 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 SIK3Q9Y2K2 1263 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 SQORQ9Y6N5 450 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 TMEM94Q12767 1356 aa4.49□□□□□ -1.69
VPS41-212ENST00000482217 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.49□□□□□ -1.69
VPS41-212ENST00000482217 IL16Q14005 1332 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 ARHGAP10A1A4S6 786 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 LRRC14BA6NHZ5 514 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 F8W8V4 182 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 K7ESM1 405 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 UBE2CO00762 179 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 NDC80O14777 642 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 NPC1O15118 1278 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 CTAGE5O15320 804 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 TEX33O43247 280 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 PLATP00750 562 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 ATP5BP06576 529 aaKnown RBP4.48□□□□□ -1.69
VPS41-212ENST00000482217 RARBP10826 455 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 C6P13671 934 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 IL2RBP14784 551 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 JUPP14923 745 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 GAP43P17677 238 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 CR2P20023 1033 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 HTR1BP28222 390 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 GUCY1A2P33402 732 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 RPS19P39019 145 aaKnown RBP4.48□□□□□ -1.69
VPS41-212ENST00000482217 BUD31P41223 144 aaPredicted RBP4.48□□□□□ -1.69
VPS41-212ENST00000482217 GZMKP49863 264 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 CCR5P51681 352 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 AGFG1P52594 562 aaKnown RBP4.48□□□□□ -1.69
VPS41-212ENST00000482217 DSC2Q02487 901 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 CREMQ03060 361 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 PLP2Q04941 152 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 NSUN2Q08J23 767 aaKnown RBP eCLIP4.48□□□□□ -1.69
VPS41-212ENST00000482217 EFEMP1Q12805 493 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 SLC14A1Q13336 389 aa4.48□□□□□ -1.69
VPS41-212ENST00000482217 SP140Q13342 867 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms