RNA–Protein interactions for RNA: ENST00000480003.5

CD46-214, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CD46, Length 1,258 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-214ENST00000480003 PPP1R9BQ96SB3 815 aa10.12□□□□□ -0.79
CD46-214ENST00000480003 TTLL2Q9BWV7 592 aa10.12□□□□□ -0.79
CD46-214ENST00000480003 ISCUQ9H1K1 167 aa10.12□□□□□ -0.79
CD46-214ENST00000480003 S1PR5Q9H228 398 aa10.12□□□□□ -0.79
CD46-214ENST00000480003 NHEJ1Q9H9Q4 299 aaPredicted RBP10.12□□□□□ -0.79
CD46-214ENST00000480003 DMAP1Q9NPF5 467 aaPredicted RBP10.12□□□□□ -0.79
CD46-214ENST00000480003 KRT82Q9NSB4 513 aa10.12□□□□□ -0.79
CD46-214ENST00000480003 ZNHIT6Q9NWK9 470 aaKnown RBP10.12□□□□□ -0.79
CD46-214ENST00000480003 ZDHHC7Q9NXF8 308 aa10.12□□□□□ -0.79
CD46-214ENST00000480003 ADAMTS1Q9UHI8 967 aa10.12□□□□□ -0.79
CD46-214ENST00000480003 NENFQ9UMX5 172 aa10.12□□□□□ -0.79
CD46-214ENST00000480003 YIPF1Q9Y548 306 aa10.12□□□□□ -0.79
CD46-214ENST00000480003 A0A087X0T9 212 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 SLC38A8A6NNN8 435 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 RNF223E7ERA6 249 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 M0QYV0 167 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 FAM228BP0C875 321 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 CSH1P0DML2 217 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 CSH2P0DML3 217 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 ANXA13P27216 316 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 ACADSBP45954 432 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 EPHB3P54753 998 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 SLC8A3P57103 927 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 DLX2Q07687 328 aaPredicted RBP10.11□□□□□ -0.79
CD46-214ENST00000480003 PPM1LQ5SGD2 360 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 ACAD10Q6JQN1 1059 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 LLGL2Q6P1M3 1020 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 CYP26C1Q6V0L0 522 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 GPRIN1Q7Z2K8 1008 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 TMTC1Q8IUR5 882 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 SCN4BQ8IWT1 228 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 LRRC8AQ8IWT6 810 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 NUP93Q8N1F7 819 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 C12orf76Q8N812 135 aaPredicted RBP10.11□□□□□ -0.79
CD46-214ENST00000480003 SCAMP5Q8TAC9 235 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 GPR152Q8TDT2 470 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 GIPC2Q8TF65 315 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 CPA5Q8WXQ8 436 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 ANP32BQ92688 251 aaKnown RBP10.11□□□□□ -0.79
CD46-214ENST00000480003 PSMG2Q969U7 264 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 MSLNLQ96KJ4 702 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 SEPT5Q99719 369 aaPredicted RBP10.11□□□□□ -0.79
CD46-214ENST00000480003 DZANK1Q9NVP4 752 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 TAS2R14Q9NYV8 317 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 DNMT3BQ9UBC3 853 aaKnown RBP10.11□□□□□ -0.79
CD46-214ENST00000480003 ATG2AQ2TAZ0 1938 aa10.11□□□□□ -0.79
CD46-214ENST00000480003 CCL16O15467 120 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 RTN2O75298 545 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 LCA5LO95447 670 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 S1PR4O95977 384 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 ADH1BP00325 375 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 LRG1P02750 347 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 F11P03951 625 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 ZDHHC11BP0C7U3 371 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 FOSL2P15408 326 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 PTPN2P17706 415 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 MMP8P22894 467 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 RGS7P49802 495 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 SLC5A3P53794 718 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 EPHA5P54756 1037 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 USP46P62068 366 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 CENPCQ03188 943 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 PTP4A2Q12974 167 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 PLD1Q13393 1074 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 MTMR3Q13615 1198 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 ZNF268Q14587 947 aaPredicted RBP10.1□□□□□ -0.79
CD46-214ENST00000480003 SLC18A3Q16572 532 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 PTPN20Q4JDL3 420 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 TDRD12Q587J7 1177 aaKnown RBP10.1□□□□□ -0.79
CD46-214ENST00000480003 LIN9Q5TKA1 542 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 NAA35Q5VZE5 725 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 ALKBH5Q6P6C2 394 aaKnown RBP10.1□□□□□ -0.79
CD46-214ENST00000480003 DENND5BQ6ZUT9 1274 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 GPR149Q86SP6 731 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 ERICH1Q86X53 443 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 PHF13Q86YI8 300 aaPredicted RBP10.1□□□□□ -0.79
CD46-214ENST00000480003 PASD1Q8IV76 773 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 CCDC170Q8IYT3 715 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 C1orf131Q8NDD1 294 aaKnown RBP10.1□□□□□ -0.79
CD46-214ENST00000480003 VCPIP1Q96JH7 1222 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 PPP1R13BQ96KQ4 1090 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 CCDC42Q96M95 316 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 ZNF512Q96ME7 567 aaPredicted RBP10.1□□□□□ -0.79
CD46-214ENST00000480003 CPXM1Q96SM3 734 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 PDCL3Q9H2J4 239 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 AVENQ9NQS1 362 aaPredicted RBP10.1□□□□□ -0.79
CD46-214ENST00000480003 NAGPAQ9UK23 515 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 SCML2Q9UQR0 700 aa10.1□□□□□ -0.79
CD46-214ENST00000480003 PTPRDP23468 1912 aa10.09□□□□□ -0.79
CD46-214ENST00000480003 CDH23Q9H251 3354 aa10.09□□□□□ -0.79
CD46-214ENST00000480003 TCRBV5S1A1TA0A578 114 aa10.09□□□□□ -0.79
CD46-214ENST00000480003 GOLGA6L6A8MZA4 724 aa10.09□□□□□ -0.79
CD46-214ENST00000480003 ZNF263O14978 683 aa10.09□□□□□ -0.79
CD46-214ENST00000480003 PAPSS1O43252 624 aaPredicted RBP10.09□□□□□ -0.79
CD46-214ENST00000480003 TBX10O75333 385 aa10.09□□□□□ -0.79
CD46-214ENST00000480003 MOSPD3O75425 235 aa10.09□□□□□ -0.79
CD46-214ENST00000480003 RTN3O95197 1032 aaPredicted RBP10.09□□□□□ -0.79
CD46-214ENST00000480003 FTLP02792 175 aaPredicted RBP10.09□□□□□ -0.79
CD46-214ENST00000480003 YWHAQP27348 245 aa10.09□□□□□ -0.79
CD46-214ENST00000480003 PDCLQ13371 301 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms