RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 POU6F2P78424 691 aaPredicted RBP6.25□□□□□ -1.41
UPF3A-205ENST00000479712 MXRA7P84157 204 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 GRM7Q14831 915 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 STARD3Q14849 445 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 SURF1Q15526 300 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 SLC35G1Q2M3R5 365 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 TUBB8Q3ZCM7 444 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 CRB2Q5IJ48 1285 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 EFCAB12Q6NXP0 572 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 TAX1BP1Q86VP1 789 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 SYTL1Q8IYJ3 562 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 TXLNBQ8N3L3 684 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 FITM2Q8N6M3 262 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 POU5F2Q8N7G0 328 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 MYRIPQ8NFW9 859 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 U2AF1L4Q8WU68 220 aaKnown RBP6.25□□□□□ -1.41
UPF3A-205ENST00000479712 SCAMP4Q969E2 229 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 TMEM41AQ96HV5 264 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 OR14A2Q96R54 314 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 ARHGAP39Q9C0H5 1083 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 TINAGL1Q9GZM7 467 aaPredicted RBP6.25□□□□□ -1.41
UPF3A-205ENST00000479712 USP40Q9NVE5 1235 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 MYO1AQ9UBC5 1043 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 MAGED2Q9UNF1 606 aaPredicted RBP6.25□□□□□ -1.41
UPF3A-205ENST00000479712 PLEKHM1Q9Y4G2 1056 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 SNED1Q8TER0 1413 aa6.25□□□□□ -1.41
UPF3A-205ENST00000479712 SOS1Q07889 1333 aaPredicted RBP6.25□□□□□ -1.41
UPF3A-205ENST00000479712 FASNP49327 2511 aaKnown RBP6.24□□□□□ -1.41
UPF3A-205ENST00000479712 COL15A1P39059 1388 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 MBD3L4A6NDZ8 208 aaPredicted RBP6.24□□□□□ -1.41
UPF3A-205ENST00000479712 MBD3L3A6NE82 208 aaPredicted RBP6.24□□□□□ -1.41
UPF3A-205ENST00000479712 PYCARD-AS1I3L0S3 204 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 M0QYG6 137 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 MYO1CO00159 1063 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 THAP12O43422 761 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 RAD17O75943 681 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 SLC6A2P23975 617 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 HOXC9P31274 260 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 CHKAP35790 457 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 SLC11A2P49281 568 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 EPHB4P54760 987 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 MPEG1Q2M385 716 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 CCDC174Q6PII3 467 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 GPRIN1Q7Z2K8 1008 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 SLC15A4Q8N697 577 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 TMIEQ8NEW7 156 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 TBC1D15Q8TC07 691 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 ST8SIA2Q92186 375 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 ZNF566Q969W8 418 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 MPHOSPH9Q99550 1183 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 IMPG2Q9BZV3 1241 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 SIK2Q9H0K1 926 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 MEGF9Q9H1U4 602 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 A1CFQ9NQ94 594 aaKnown RBP6.24□□□□□ -1.41
UPF3A-205ENST00000479712 GGA3Q9NZ52 723 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 CLCA2Q9UQC9 943 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 USP34Q70CQ2 3546 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 GPR179Q6PRD1 2367 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 C5orf42Q9H799 3197 aa6.24□□□□□ -1.41
UPF3A-205ENST00000479712 RAB3GAP2Q9H2M9 1393 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 A0A087WWL8 130 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 hCG_1642624A0A1W2PR95 340 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 PPIP5K2O43314 1243 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 LAMTOR5O43504 91 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 IPO13O94829 963 aaKnown RBP6.23□□□□□ -1.41
UPF3A-205ENST00000479712 CHEK2O96017 543 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 MT-ND5P03915 603 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 ITGB1P05556 798 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 PIM1P11309 404 aaPredicted RBP6.23□□□□□ -1.41
UPF3A-205ENST00000479712 EEF1GP26641 437 aaKnown RBP6.23□□□□□ -1.41
UPF3A-205ENST00000479712 KLRC1P26715 233 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 CARSP49589 748 aaKnown RBP6.23□□□□□ -1.41
UPF3A-205ENST00000479712 UCP3P55916 312 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 ICA1Q05084 483 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 ELAVL1Q15717 326 aaKnown RBP6.23□□□□□ -1.41
UPF3A-205ENST00000479712 ELF2Q15723 593 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 TMEM95Q3KNT9 176 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 LCE4AQ5TA78 99 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 SLFN13Q68D06 897 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 PGBD2Q6P3X8 592 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 UNC13DQ70J99 1090 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 BEND5Q7L4P6 421 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 USP37Q86T82 979 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 SP8Q8IXZ3 490 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 ELOA2Q8IYF1 753 aaPredicted RBP6.23□□□□□ -1.41
UPF3A-205ENST00000479712 NKAPQ8N5F7 415 aaKnown RBP6.23□□□□□ -1.41
UPF3A-205ENST00000479712 CNBD1Q8NA66 436 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 FANCBQ8NB91 859 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 ZSCAN18Q8TBC5 510 aaPredicted RBP6.23□□□□□ -1.41
UPF3A-205ENST00000479712 KLHL32Q96NJ5 620 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 SCLT1Q96NL6 688 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 TTLL2Q9BWV7 592 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 STK31Q9BXU1 1019 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 CPEB1Q9BZB8 566 aaKnown RBP6.23□□□□□ -1.41
UPF3A-205ENST00000479712 GJB4Q9NTQ9 266 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 PLA2G3Q9NZ20 509 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 ITGB1BP2Q9UKP3 347 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 AGAP1Q9UPQ3 857 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 TMX2Q9Y320 296 aa6.23□□□□□ -1.41
UPF3A-205ENST00000479712 WDFY4Q6ZS81 3184 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms