RNA–Protein interactions for RNA: ENST00000479176.5

FXR1-213, Transcript of FMR1 autosomal homolog 1, humanhuman

TSL 2

Gene FXR1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXR1-213ENST00000479176 POM121CA8CG34 1229 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 ARNTLO00327 626 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 P4HA2O15460 535 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 GDF9O60383 454 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 CCDC130P13994 396 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 CD58P19256 250 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 AOC1P19801 751 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 ANXA13P27216 316 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 AVPR2P30518 371 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 CLCN5P51795 746 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 STARD6P59095 220 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 ORC1Q13415 861 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 GRM2Q14416 872 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 MLF2Q15773 248 aaPredicted RBP11.22□□□□□ -0.61
FXR1-213ENST00000479176 WDR44Q5JSH3 913 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 PHLDB3Q6NSJ2 640 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 WDFY4Q6ZS81 3184 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 CMTM8Q8IZV2 173 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 TMEM105Q8N8V8 129 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 C12orf29Q8N999 325 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 ZMIZ2Q8NF64 920 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 SLC2A14Q8TDB8 520 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 MRPS31Q92665 395 aaKnown RBP11.22□□□□□ -0.61
FXR1-213ENST00000479176 SMARCD1Q96GM5 515 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 LRRC3BQ96PB8 259 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 HNRNPABQ99729 332 aaKnown RBP11.22□□□□□ -0.61
FXR1-213ENST00000479176 ARID3AQ99856 593 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 DDX23Q9BUQ8 820 aaKnown RBP11.22□□□□□ -0.61
FXR1-213ENST00000479176 TRMT61BQ9BVS5 477 aaKnown RBP11.22□□□□□ -0.61
FXR1-213ENST00000479176 NT5C1AQ9BXI3 368 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 SRRTQ9BXP5 876 aaKnown RBP11.22□□□□□ -0.61
FXR1-213ENST00000479176 MFSD1Q9H3U5 465 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 CSNK1G1Q9HCP0 422 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 DMAP1Q9NPF5 467 aaPredicted RBP11.22□□□□□ -0.61
FXR1-213ENST00000479176 TRPV5Q9NQA5 729 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 EHD2Q9NZN4 543 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 CDV3Q9UKY7 258 aaKnown RBP11.22□□□□□ -0.61
FXR1-213ENST00000479176 MYO16Q9Y6X6 1858 aa11.22□□□□□ -0.61
FXR1-213ENST00000479176 TNFRSF10BO14763 440 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 SIAH2O43255 324 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 FGFR1OPO95684 399 aaKnown RBP11.21□□□□□ -0.61
FXR1-213ENST00000479176 TRIM21P19474 475 aaKnown RBP11.21□□□□□ -0.61
FXR1-213ENST00000479176 GDI1P31150 447 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 PPP3CCP48454 512 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 PRKCQQ04759 706 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 CUL2Q13617 745 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 ZNF268Q14587 947 aaPredicted RBP11.21□□□□□ -0.61
FXR1-213ENST00000479176 DPCR1Q3MIW9 517 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 SLC44A4Q53GD3 710 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 TXNDC8Q6A555 127 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 RBM43Q6ZSC3 357 aaKnown RBP11.21□□□□□ -0.61
FXR1-213ENST00000479176 IRF2BP1Q8IU81 584 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 CELF5Q8N6W0 485 aaKnown RBP11.21□□□□□ -0.61
FXR1-213ENST00000479176 UBR7Q8N806 425 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 LMO3Q8TAP4 145 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 USP13Q92995 863 aaPredicted RBP11.21□□□□□ -0.61
FXR1-213ENST00000479176 KCNK16Q96T55 309 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 SMOQ99835 787 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 MED10Q9BTT4 135 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 SMG9Q9H0W8 520 aaKnown RBP11.21□□□□□ -0.61
FXR1-213ENST00000479176 BRD9Q9H8M2 597 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 TBC1D17Q9HA65 648 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 KRT82Q9NSB4 513 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 CISHQ9NSE2 258 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 FAM49BQ9NUQ9 324 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 IL37Q9NZH6 218 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 GCNT4Q9P109 453 aa11.21□□□□□ -0.61
FXR1-213ENST00000479176 CACNA1IQ9P0X4 2223 aa11.21□□□□□ -0.62
FXR1-213ENST00000479176 FAM92AA1XBS5 289 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 ZNF840PA6NDX5 716 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 SHISA7A6NL88 538 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 GOLGA6L22H0YM25 854 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 ZNF263O14978 683 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 CHADO15335 359 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 BEST1O76090 585 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 RTN3O95197 1032 aaPredicted RBP11.2□□□□□ -0.62
FXR1-213ENST00000479176 FAM200BP0CF97 657 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 CCDC192P0DO97 292 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 PFKLP17858 780 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 TBXAS1P24557 533 aaPredicted RBP11.2□□□□□ -0.62
FXR1-213ENST00000479176 ERCC5P28715 1186 aaPredicted RBP11.2□□□□□ -0.62
FXR1-213ENST00000479176 AVPR1AP37288 418 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 RAD23BP54727 409 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 ARID5BQ14865 1188 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 NUP93Q8N1F7 819 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 MAB21L3Q8N8X9 362 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 SLC4A11Q8NBS3 891 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 FLCNQ8NFG4 579 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 BPIFB1Q8TDL5 484 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 IRF7Q92985 503 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 TMEM176AQ96HP8 235 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 SHDQ96IW2 340 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 SLC22A12Q96S37 553 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 DNAI2Q9GZS0 605 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 KIF9Q9HAQ2 790 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 TDP1Q9NUW8 608 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 COMMD8Q9NX08 183 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 CCL26Q9Y258 94 aa11.2□□□□□ -0.62
FXR1-213ENST00000479176 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.2□□□□□ -0.62
FXR1-213ENST00000479176 TRAV19A0A0A6YYK7 116 aa11.19□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms