RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 H7C0C1 242 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 APOC4-APOC2K7ER74 178 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 PRPF4O43172 522 aaKnown RBP eCLIP11.28□□□□□ -0.61e-6■■■■■ 32.4
VPS52-217ENST00000478934 APOC2P02655 101 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 EPHB2P29323 1055 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 GJA5P36382 358 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 ATP5OP48047 213 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 TMEM132DQ14C87 1099 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 GOLGA7BQ2TAP0 167 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 CCDC14Q49A88 953 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 TLDC1Q6P9B6 456 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 MAMDC4Q6UXC1 1216 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 ERO1BQ86YB8 467 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 RFWD2Q8NHY2 731 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 MZB1Q8WU39 189 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 PRR11Q96HE9 360 aaPredicted RBP11.28□□□□□ -0.6
VPS52-217ENST00000478934 ZMAT2Q96NC0 199 aaKnown RBP11.28□□□□□ -0.6
VPS52-217ENST00000478934 ZNF570Q96NI8 536 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 DPP3Q9NY33 737 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 ERAP1Q9NZ08 941 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 C2CD4BA6NLJ0 364 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 MCF2LO15068 1137 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 UGT1A9O60656 530 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 IL18RAPO95256 599 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 GM2AP17900 193 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 RBL1P28749 1068 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 PHKA2P46019 1235 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 ERFP50548 548 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 ZNF143P52747 638 aaPredicted RBP11.28□□□□□ -0.6
VPS52-217ENST00000478934 FAAP100Q0VG06 881 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 KIZQ2M2Z5 673 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 KBTBD12Q3ZCT8 623 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 TAF1BQ53T94 588 aaPredicted RBP11.28□□□□□ -0.6
VPS52-217ENST00000478934 PPP6R3Q5H9R7 873 aaPredicted RBP11.28□□□□□ -0.6
VPS52-217ENST00000478934 RNF43Q68DV7 783 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 MTDHQ86UE4 582 aaKnown RBP11.28□□□□□ -0.6
VPS52-217ENST00000478934 TTC30AQ86WT1 665 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 RIBC1Q8N443 379 aaPredicted RBP11.28□□□□□ -0.6
VPS52-217ENST00000478934 ZNF276Q8N554 614 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 C18orf25Q96B23 403 aaPredicted RBP11.28□□□□□ -0.6
VPS52-217ENST00000478934 KIF12Q96FN5 646 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 CFAP36Q96G28 342 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 DPEP3Q9H4B8 488 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 UGT1A7Q9HAW7 530 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 UGT1A10Q9HAW8 530 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 UGT1A8Q9HAW9 530 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 CDHR5Q9HBB8 845 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 RAB6BQ9NRW1 208 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 PRMT7Q9NVM4 692 aaPredicted RBP11.28□□□□□ -0.6
VPS52-217ENST00000478934 C15orf41Q9Y2V0 281 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 MFHAS1Q9Y4C4 1052 aa11.28□□□□□ -0.6
VPS52-217ENST00000478934 A0A0G2JND7 137 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 TCRBV9S1A1TA0A576 114 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 CXorf49A8MYA2 514 aaPredicted RBP11.27□□□□□ -0.6
VPS52-217ENST00000478934 KCNN4O15554 427 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 EDF1O60869 148 aaKnown RBP11.27□□□□□ -0.6
VPS52-217ENST00000478934 T-ENOLP0DO92 83 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 GPD1P21695 349 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 IREB2P48200 963 aaKnown RBP11.27□□□□□ -0.6
VPS52-217ENST00000478934 YWHAGP61981 247 aaKnown RBP eCLIP11.27□□□□□ -0.6
VPS52-217ENST00000478934 TTLL4Q14679 1199 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 PDK4Q16654 411 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 TAPT1Q6NXT6 567 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 LRRC6Q86X45 466 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 PQLC3Q8N755 202 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 GBP7Q8N8V2 638 aaPredicted RBP11.27□□□□□ -0.6
VPS52-217ENST00000478934 ATP11CQ8NB49 1132 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 MAGEC3Q8TD91 643 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 FNIP1Q8TF40 1166 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 NDRG1Q92597 394 aaKnown RBP11.27□□□□□ -0.6
VPS52-217ENST00000478934 KHSRPQ92945 711 aaKnown RBP eCLIP11.27□□□□□ -0.6
VPS52-217ENST00000478934 ACSS3Q9H6R3 686 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 USP29Q9HBJ7 922 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 TUBGCP4Q9UGJ1 667 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 SNX9Q9Y5X1 595 aa11.27□□□□□ -0.6
VPS52-217ENST00000478934 MYO18AQ92614 2054 aaKnown RBP11.27□□□□□ -0.61
VPS52-217ENST00000478934 GAS2O43903 313 aaKnown RBP11.27□□□□□ -0.61
VPS52-217ENST00000478934 TSPAN1O60635 241 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 SLC25A27O95847 323 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 VDRP11473 427 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 GABRB2P47870 512 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 ROR1Q01973 937 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 SETDB1Q15047 1291 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 ADGRD1Q6QNK2 874 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 PDIK1LQ8N165 341 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 PLD5Q8N7P1 536 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 C7orf31Q8N865 590 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 PCDH19Q8TAB3 1148 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 TTC8Q8TAM2 541 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 CCDC110Q8TBZ0 833 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 FAF2Q96CS3 445 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 CDCA5Q96FF9 252 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 FAM167BQ9BTA0 163 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 EBF2Q9HAK2 575 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 ASNSD1Q9NWL6 643 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 PIH1D1Q9NWS0 290 aaKnown RBP11.27□□□□□ -0.61
VPS52-217ENST00000478934 SNTG2Q9NY99 539 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 KANSL3Q9P2N6 904 aa11.27□□□□□ -0.61
VPS52-217ENST00000478934 BARX2Q9UMQ3 279 aaPredicted RBP11.27□□□□□ -0.61
VPS52-217ENST00000478934 SPDYE5A6NIY4 337 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms