RNA–Protein interactions for RNA: ENST00000477554.5

PTPN7-209, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 2

Gene PTPN7, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-209ENST00000477554 E2F7Q96AV8 911 aa18.67■□□□□ 0.58
PTPN7-209ENST00000477554 TMEM176AQ96HP8 235 aa18.67■□□□□ 0.58
PTPN7-209ENST00000477554 HEXIM2Q96MH2 286 aaKnown RBP18.67■□□□□ 0.58
PTPN7-209ENST00000477554 TRPV5Q9NQA5 729 aa18.67■□□□□ 0.58
PTPN7-209ENST00000477554 C2orf42Q9NWW7 574 aa18.67■□□□□ 0.58
PTPN7-209ENST00000477554 NFE2L3Q9Y4A8 694 aa18.67■□□□□ 0.58
PTPN7-209ENST00000477554 ARIH1Q9Y4X5 557 aaPredicted RBP18.67■□□□□ 0.58
PTPN7-209ENST00000477554 TBX18O95935 607 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 FAM200BP0CF97 657 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 MARSP56192 900 aaKnown RBP18.66■□□□□ 0.58
PTPN7-209ENST00000477554 GAS6Q14393 721 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 ANGPT1Q15389 498 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 GJB7Q6PEY0 223 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 ZNF852Q6ZMS4 543 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 LUZP1Q86V48 1076 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 TTC30AQ86WT1 665 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 CREBRFQ8IUR6 639 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 CCDC150Q8NCX0 1101 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 FAM3CQ92520 227 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 ZFRQ96KR1 1074 aaKnown RBP18.66■□□□□ 0.58
PTPN7-209ENST00000477554 CNOT6LQ96LI5 555 aaKnown RBP18.66■□□□□ 0.58
PTPN7-209ENST00000477554 RBSNQ9H1K0 784 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 NMUR1Q9HB89 426 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 NUDT5Q9UKK9 219 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 CPQQ9Y646 472 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 ATP8B3O60423 1300 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 SPECC1L-ADORA2AF8WAN1 911 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 COCHO43405 550 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 OLFM2O95897 454 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 USP17L7P0C7H9 530 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 ZDHHC11BP0C7U3 371 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 CTHP32929 405 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 MTF1Q14872 753 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 PON2Q15165 354 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 ARHGAP29Q52LW3 1261 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 CSGALNACT1Q8TDX6 532 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 TFAP2BQ92481 460 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 NDRG1Q92597 394 aaKnown RBP18.66■□□□□ 0.58
PTPN7-209ENST00000477554 SHDQ96IW2 340 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 CEP295NLQ96MC4 621 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 KREMEN1Q96MU8 473 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 CRACR2AQ9BSW2 395 aa18.66■□□□□ 0.58
PTPN7-209ENST00000477554 FBRSL1Q9HCM7 1045 aaKnown RBP18.66■□□□□ 0.58
PTPN7-209ENST00000477554 FAM92AA1XBS5 289 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 GOLGA6L3A6NEY3 463 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 LEFTY2O00292 366 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 MDM4O15151 490 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 KPNA1P52294 538 aaPredicted RBP18.65■□□□□ 0.58
PTPN7-209ENST00000477554 PTPN5P54829 565 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 ZNF268Q14587 947 aaPredicted RBP18.65■□□□□ 0.58
PTPN7-209ENST00000477554 GSE1Q14687 1217 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 NCAPHQ15003 741 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 Q6ZS52 159 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 CLDN23Q96B33 292 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 DUSP16Q9BY84 665 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 INTS2Q9H0H0 1204 aaKnown RBP18.65■□□□□ 0.58
PTPN7-209ENST00000477554 KCNH6Q9H252 994 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 THAP9Q9H5L6 903 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 AJAP1Q9UKB5 411 aaPredicted RBP18.65■□□□□ 0.58
PTPN7-209ENST00000477554 ARHGAP26Q9UNA1 814 aa18.65■□□□□ 0.58
PTPN7-209ENST00000477554 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.65■□□□□ 0.58
PTPN7-209ENST00000477554 FRYLO94915 3013 aa18.64■□□□□ 0.58
PTPN7-209ENST00000477554 MYOFQ9NZM1 2061 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 ATG2BQ96BY7 2078 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 PMM2O15305 246 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 GABBR2O75899 941 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 AFPP02771 609 aaKnown RBP18.64■□□□□ 0.57
PTPN7-209ENST00000477554 CHRNB1P11230 501 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 RUNX3Q13761 415 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 GOLGA7BQ2TAP0 167 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 TSSK4Q6SA08 328 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 FAM114A1Q8IWE2 563 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 PPM1KQ8N3J5 372 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 EHBP1Q8NDI1 1231 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 ATOH1Q92858 354 aaPredicted RBP18.64■□□□□ 0.57
PTPN7-209ENST00000477554 SLITRK1Q96PX8 696 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 ACP6Q9NPH0 428 aa18.64■□□□□ 0.57
PTPN7-209ENST00000477554 POLR3BQ9NW08 1133 aaPredicted RBP18.64■□□□□ 0.57
PTPN7-209ENST00000477554 A0A1W2PQH9 124 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 RTN3O95197 1032 aaPredicted RBP18.63■□□□□ 0.57
PTPN7-209ENST00000477554 SLC9A1P19634 815 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 SLC7A9P82251 487 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 MTAPQ13126 283 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 GAB4Q2WGN9 574 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 EML3Q32P44 896 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 PKN3Q6P5Z2 889 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 TMEM270Q6UE05 265 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 SCD5Q86SK9 330 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 ALYREFQ86V81 257 aaKnown RBP18.63■□□□□ 0.57
PTPN7-209ENST00000477554 UBA3Q8TBC4 463 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 OSCP1Q8WVF1 389 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 NT5C1BQ96P26 610 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 KIF9Q9HAQ2 790 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 LMAN1LQ9HAT1 526 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 FANCLQ9NW38 375 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 DUS2Q9NX74 493 aaKnown RBP18.63■□□□□ 0.57
PTPN7-209ENST00000477554 WDR87Q6ZQQ6 2873 aa18.63■□□□□ 0.57
PTPN7-209ENST00000477554 SOBPA7XYQ1 873 aa18.62■□□□□ 0.57
PTPN7-209ENST00000477554 GNA14O95837 355 aa18.62■□□□□ 0.57
PTPN7-209ENST00000477554 MBL2P11226 248 aaPredicted RBP18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms