RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 STARD7Q9NQZ5 370 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 ENO4A6NNW6 628 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 TRIM49D1C9J1S8 452 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 C9orf131Q5VYM1 1079 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 SETD3Q86TU7 594 aaPredicted RBP19.2■□□□□ 0.66
VARS2-209ENST00000477288 SLC12A8A0AV02 714 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 MSH4O15457 936 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 CSF1RP07333 972 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 CKBP12277 381 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 PSMA4P25789 261 aaKnown RBP19.2■□□□□ 0.66
VARS2-209ENST00000477288 RAP1GAPP47736 663 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 CTCFP49711 727 aaPredicted RBP19.2■□□□□ 0.66
VARS2-209ENST00000477288 AGAP9Q5VTM2 703 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 CPA4Q9UI42 421 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 TSC22D4Q9Y3Q8 395 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 OVGP1Q12889 678 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 BOLA3Q53S33 107 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 ACAD10Q6JQN1 1059 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 DYRK1BQ9Y463 629 aa19.2■□□□□ 0.66
VARS2-209ENST00000477288 FXR1P51114 621 aaKnown RBP eCLIP19.19■□□□□ 0.66
VARS2-209ENST00000477288 FXR2P51116 673 aaKnown RBP eCLIP19.19■□□□□ 0.66
VARS2-209ENST00000477288 DENND1BQ6P3S1 775 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 KRT77Q7Z794 578 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 MKNK1Q9BUB5 465 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 RUSC1Q9BVN2 902 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 GPRC5CQ9NQ84 441 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 SEPT3Q9UH03 358 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 SMAPO00193 183 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 ANXA11P50995 505 aaKnown RBP19.19■□□□□ 0.66
VARS2-209ENST00000477288 C16orf72Q14CZ0 275 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 AGBL2Q5U5Z8 902 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 CYP39A1Q9NYL5 469 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 MYO3AQ8NEV4 1616 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 E9PBE3 544 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 EIF3HO15372 352 aaKnown RBP eCLIP19.19■□□□□ 0.661e-7■□□□□ 11
VARS2-209ENST00000477288 ZNF23P17027 643 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 MUTP22033 750 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 RPL10AP62906 217 aaKnown RBP19.19■□□□□ 0.66
VARS2-209ENST00000477288 RHOCP08134 193 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 RHOAP61586 193 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 BARGINQ6ZT62 677 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 FBXO33Q7Z6M2 555 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 MYO1HQ8N1T3 1032 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 RMND5AQ9H871 391 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 SENP2Q9HC62 589 aa19.19■□□□□ 0.66
VARS2-209ENST00000477288 PCDH8O95206 1070 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 CYP11B2P19099 503 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 GRK3P35626 688 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 IFNLR1Q8IU57 520 aaPredicted RBP19.18■□□□□ 0.66
VARS2-209ENST00000477288 B3GALNT2Q8NCR0 500 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 ASZ1Q8WWH4 475 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 MAP10Q9P2G4 905 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 OGTO15294 1046 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 MAPK9P45984 424 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 COPAP53621 1224 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 MPZL3Q6UWV2 235 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 ARID3BQ8IVW6 561 aaPredicted RBP19.18■□□□□ 0.66
VARS2-209ENST00000477288 UNC45BQ8IWX7 931 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 PCSK9Q8NBP7 692 aaKnown RBP19.18■□□□□ 0.66
VARS2-209ENST00000477288 ZNF333Q96JL9 665 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 FAM111AQ96PZ2 611 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 TMCC3Q9ULS5 477 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 PADI4Q9UM07 663 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 AAR2Q9Y312 384 aaKnown RBP19.18■□□□□ 0.66
VARS2-209ENST00000477288 CYP7B1O75881 506 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 FEN1P39748 380 aaKnown RBP19.18■□□□□ 0.66
VARS2-209ENST00000477288 TIGD7Q6NT04 549 aaPredicted RBP19.18■□□□□ 0.66
VARS2-209ENST00000477288 TMC7Q7Z402 723 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 BNIPLQ7Z465 357 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 HERC6Q8IVU3 1022 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 CYP4F12Q9HCS2 524 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 AGPAT3Q9NRZ7 376 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 CLTCQ00610 1675 aaKnown RBP19.18■□□□□ 0.66
VARS2-209ENST00000477288 ADAMTS13Q76LX8 1427 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 NUP62P37198 522 aaPredicted RBP19.18■□□□□ 0.66
VARS2-209ENST00000477288 COILP38432 576 aaPredicted RBP19.18■□□□□ 0.66
VARS2-209ENST00000477288 GLRBP48167 497 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 TMED10P49755 219 aaKnown RBP19.18■□□□□ 0.66
VARS2-209ENST00000477288 FOXP3Q9BZS1 431 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 RNPEPQ9H4A4 650 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 NEXMIFQ5QGS0 1516 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 RAB14P61106 215 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 C16orf62Q7Z3J2 963 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 MMGT1Q8N4V1 131 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 CCDC3Q9BQI4 270 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 MRGBPQ9NV56 204 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 PCDHB12Q9Y5F1 795 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 RPS6KL1Q9Y6S9 549 aa19.18■□□□□ 0.66
VARS2-209ENST00000477288 CAP2P40123 477 aa19.17■□□□□ 0.66
VARS2-209ENST00000477288 CCNI2Q6ZMN8 369 aaPredicted RBP19.17■□□□□ 0.66
VARS2-209ENST00000477288 GPATCH2LQ9NWQ4 482 aa19.17■□□□□ 0.66
VARS2-209ENST00000477288 ITPK1Q13572 414 aa19.17■□□□□ 0.66
VARS2-209ENST00000477288 KCNB2Q92953 911 aa19.17■□□□□ 0.66
VARS2-209ENST00000477288 ILKAPQ9H0C8 392 aaPredicted RBP19.17■□□□□ 0.66
VARS2-209ENST00000477288 IARS2Q9NSE4 1012 aaKnown RBP19.17■□□□□ 0.66
VARS2-209ENST00000477288 GPR75-ASB3A0A0A6YYF3 556 aa19.17■□□□□ 0.66
VARS2-209ENST00000477288 CASTOR2A6NHX0 329 aa19.17■□□□□ 0.66
VARS2-209ENST00000477288 IGF2BP3O00425 579 aaKnown RBP eCLIP19.17■□□□□ 0.66
VARS2-209ENST00000477288 TSC22D2O75157 780 aa19.17■□□□□ 0.66
VARS2-209ENST00000477288 THP07101 528 aa19.17■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms