RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, human

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCM2-208	ENST00000476594	PPP1R3G	B7ZBB8	358 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	LEFTY2	O00292	366 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	TNFRSF10B	O14763	440 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	LRRN2	O75325	713 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	OLFM2	O95897	454 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	RALA	P11233	206 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	ACO1	P21399	889 aa	Known RBP	10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	CXCL12	P48061	93 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	SOX9	P48436	509 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	CSTF1	Q05048	431 aa	Known RBP	10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	TNK2	Q07912	1038 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	ORC1	Q13415	861 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	PON2	Q15165	354 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	CBWD6	Q4V339	395 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	SGO2	Q562F6	1265 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	CBWD3	Q5JTY5	395 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	CBWD5	Q5RIA9	395 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	SNX30	Q5VWJ9	437 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	TTI2	Q6NXR4	508 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	CLEC20A	Q6ZU45	233 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	NUDT18	Q6ZVK8	323 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	PAQR9	Q6ZVX9	377 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	FAM114A1	Q8IWE2	563 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	ARHGAP18	Q8N392	663 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	C12orf29	Q8N999	325 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	MLKL	Q8NB16	471 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	TTC8	Q8TAM2	541 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	SECISBP2L	Q93073	1101 aa	Known RBP	10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	LRRC3B	Q96PB8	259 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	CYP2S1	Q96SQ9	504 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	SMO	Q99835	787 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	DUSP16	Q9BY84	665 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	ECT2	Q9H8V3	914 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	ZSCAN32	Q9NX65	697 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	IL37	Q9NZH6	218 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	RWDD2A	Q9UIY3	292 aa		10.79	□□□□□ -0.68
CCM2-208	ENST00000476594	COL4A2	P08572	1712 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	GREB1	Q4ZG55	1949 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	MYH10	P35580	1976 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	E2F8	A0AVK6	867 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	HAX1	O00165	279 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	TRDMT1	O14717	391 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	TLR5	O60602	858 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	ADH1C	P00326	375 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	LMNA	P02545	664 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	AFP	P02771	609 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	CHRNB1	P11230	501 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	CD44	P16070	742 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	ATP5C1	P36542	298 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	CACNA2D1	P54289	1103 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	BCAT1	P54687	386 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	MARS	P56192	900 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	STX17	P56962	302 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	MTAP	Q13126	283 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	STIL	Q15468	1287 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	CAMK4	Q16566	473 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	PPP1R26	Q5T8A7	1209 aa	Predicted RBP	10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	TRIM68	Q6AZZ1	485 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	PPM1K	Q8N3J5	372 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	SCAMP5	Q8TAC9	235 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	SEMA4D	Q92854	862 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	CD101	Q93033	1021 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	JAKMIP2	Q96AA8	810 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	ACD	Q96AP0	544 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	ELMO3	Q96BJ8	720 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	TWNK	Q96RR1	684 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	SLC22A12	Q96S37	553 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	P2RY13	Q9BPV8	354 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	SRRT	Q9BXP5	876 aa	Known RBP	10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	UBXN6	Q9BZV1	441 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	NUP62CL	Q9H1M0	184 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	HPS4	Q9NQG7	708 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	PRMT8	Q9NR22	394 aa	Predicted RBP	10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	GMIP	Q9P107	970 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	RAB23	Q9ULC3	237 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	SCML2	Q9UQR0	700 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	WNT6	Q9Y6F9	365 aa		10.78	□□□□□ -0.68
CCM2-208	ENST00000476594	KIF26A	Q9ULI4	1882 aa	Predicted RBP	10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	PRR23A	A6NEV1	266 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	PAPSS2	O95340	614 aa	Predicted RBP	10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	PAEP	P09466	180 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	ZDHHC11B	P0C7U3	371 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	VDR	P11473	427 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	ARSA	P15289	507 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	CD19	P15391	556 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	GJA4	P35212	333 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	EIF2D	P41214	584 aa	Known RBP	10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	BST2	Q10589	180 aa	Known RBP	10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	CCIN	Q13939	588 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	EML3	Q32P44	896 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	TMEM196	Q5HYL7	178 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	BTBD8	Q5XKL5	378 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	ARHGAP17	Q68EM7	881 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	TXNDC11	Q6PKC3	985 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	CCDC186	Q7Z3E2	898 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	CREBRF	Q8IUR6	639 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	ANKRD52	Q8NB46	1076 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	SLC4A11	Q8NBS3	891 aa		10.77	□□□□□ -0.69
CCM2-208	ENST00000476594	ZMIZ2	Q8NF64	920 aa		10.77	□□□□□ -0.69

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