RNA–Protein interactions for RNA: ENST00000476215.5

PTCD3-211, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 754 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-211ENST00000476215 FAM234BA2RU67 622 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 F5H423 210 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-211ENST00000476215 PODXLO00592 558 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 ADAMTS3O15072 1205 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 PPFIA2O75334 1257 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 IL6RP08887 468 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-211ENST00000476215 GABRB3P28472 473 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 EPHA3P29320 983 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 PLA2G5P39877 138 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 IL6STP40189 918 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-211ENST00000476215 MTHFSP49914 203 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 BMPR2Q13873 1038 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 PEG10Q86TG7 708 aaKnown RBP5.87□□□□□ -1.47
PTCD3-211ENST00000476215 CAND1Q86VP6 1230 aaKnown RBP5.87□□□□□ -1.47
PTCD3-211ENST00000476215 MYLK4Q86YV6 388 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-211ENST00000476215 GLIS1Q8NBF1 620 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 FAM98AQ8NCA5 519 aaKnown RBP5.87□□□□□ -1.47
PTCD3-211ENST00000476215 RFKQ969G6 155 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 ZNF668Q96K58 619 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-211ENST00000476215 BBC3Q96PG8 261 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-211ENST00000476215 CRB3Q9BUF7 120 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 WDR12Q9GZL7 423 aaKnown RBP5.87□□□□□ -1.47
PTCD3-211ENST00000476215 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.87□□□□□ -1.473e-6■■□□□ 12.4
PTCD3-211ENST00000476215 SLC25A32Q9H2D1 315 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 DNAJB11Q9UBS4 358 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 SLC39A10Q9ULF5 831 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 MAGED2Q9UNF1 606 aaPredicted RBP5.87□□□□□ -1.47
PTCD3-211ENST00000476215 USP22Q9UPT9 525 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 SALL3Q9BXA9 1300 aa5.87□□□□□ -1.47
PTCD3-211ENST00000476215 NISCHQ9Y2I1 1504 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 HNRNPDLO14979 420 aaKnown RBP5.86□□□□□ -1.47
PTCD3-211ENST00000476215 KCNQ3O43525 872 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 ORC4O43929 436 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 PLA2G6O60733 806 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 COQ9O75208 318 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 URI1O94763 535 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-211ENST00000476215 NUDT3O95989 172 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 NTSR1P30989 418 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 ALDH9A1P49189 494 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 GATMP50440 423 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 PDE1AP54750 535 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 TNFAIP2Q03169 654 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 PLAC9Q5JTB6 97 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 FAXCQ5TGI0 409 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 USP17L6PQ6QN14 398 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 USP49Q70CQ1 688 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 ENAHQ8N8S7 591 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-211ENST00000476215 NTN5Q8WTR8 489 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-211ENST00000476215 POF1BQ8WVV4 589 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 SOCS4Q8WXH5 440 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 MUL1Q969V5 352 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 C18orf8Q96DM3 657 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 TMEM41AQ96HV5 264 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 HIST1H2AAQ96QV6 131 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 GDF15Q99988 308 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 ARPC5LQ9BPX5 153 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 DPCDQ9BVM2 203 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-211ENST00000476215 TTLL2Q9BWV7 592 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 STK33Q9BYT3 514 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 INO80BQ9C086 356 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-211ENST00000476215 PCDHAC1Q9H158 963 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 ZBTB26Q9HCK0 441 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 RGL1Q9NZL6 768 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 CCNL1Q9UK58 526 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-211ENST00000476215 ZMYND8Q9ULU4 1186 aaPredicted RBP5.86□□□□□ -1.47
PTCD3-211ENST00000476215 DRG1Q9Y295 367 aaKnown RBP5.86□□□□□ -1.47
PTCD3-211ENST00000476215 COX11Q9Y6N1 276 aa5.86□□□□□ -1.47
PTCD3-211ENST00000476215 COL11A2P13942 1736 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-211ENST00000476215 CCDC151A5D8V7 595 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 SNX2O60749 519 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 ONECUT2O95948 504 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 YY1P25490 414 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 GRIA3P42263 894 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 TIAL1Q01085 375 aaKnown RBP eCLIP5.85□□□□□ -1.47
PTCD3-211ENST00000476215 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.85□□□□□ -1.47
PTCD3-211ENST00000476215 RAP1GAP2Q684P5 730 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 MRNIPQ6NTE8 343 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 GGT6Q6P531 493 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 KIAA0408Q6ZU52 694 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 CCDC28AQ8IWP9 274 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 LRRC71Q8N4P6 559 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 SIMC1Q8NDZ2 872 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 CYP2W1Q8TAV3 490 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 ZNF764Q96H86 408 aaPredicted RBP5.85□□□□□ -1.47
PTCD3-211ENST00000476215 FAM227BQ96M60 508 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 VN1R3Q9BXE9 311 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 ZCWPW1Q9H0M4 648 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 ARHGEF3Q9NR81 526 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 TM7SF3Q9NS93 570 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 TMOD4Q9NZQ9 345 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 FOXJ2Q9P0K8 574 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 ZNHIT2Q9UHR6 403 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 SH2B3Q9UQQ2 575 aa5.85□□□□□ -1.47
PTCD3-211ENST00000476215 A0A087WV62 115 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 LINC00473A8K010 186 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 AGPSO00116 658 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 PSMD9O00233 223 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 CCNT2O60583 730 aaKnown RBP5.84□□□□□ -1.47
PTCD3-211ENST00000476215 TTLL1O95922 423 aa5.84□□□□□ -1.47
PTCD3-211ENST00000476215 EBLN1P0CF75 366 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms