RNA–Protein interactions for RNA: ENST00000475973.1

UBR4-212, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 600 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-212ENST00000475973 ASIC3Q9UHC3 531 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 IP6K2Q9UHH9 426 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 BAIAP2L1Q9UHR4 511 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 PHTF1Q9UMS5 762 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 NUMBLQ9Y6R0 609 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 RLFQ13129 1914 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 PARP14Q460N5 1801 aa7.2□□□□□ -1.26
UBR4-212ENST00000475973 A0A0B4J269 797 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 GOLGA8IPA6NC78 632 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 GOLGA8JA6NMD2 632 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 TMEM110-MUSTN1A8MSY1 372 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 KIAA0355O15063 1070 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 STAM2O75886 525 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 DCTN3O75935 186 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 ZWINTO95229 277 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 S1PR4O95977 384 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 ASS1P00966 412 aaKnown RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 HLA-DRAP01903 254 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 ASGR1P07306 291 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 PIM1P11309 404 aaPredicted RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 TBXAS1P24557 533 aaPredicted RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 PTPN4P29074 926 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 STX2P32856 288 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 ICAM3P32942 547 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 ADCY8P40145 1251 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 CDKN2BP42772 138 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 AP3M2P53677 418 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 CNTN2Q02246 1040 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 TAP1Q03518 808 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 FPGSQ05932 587 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 MTMR1Q13613 665 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 LBRQ14739 615 aaKnown RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 KRT72Q14CN4 511 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 E2F5Q15329 346 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 TARBP2Q15633 366 aaKnown RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 SLC1A5Q15758 541 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 CRTC2Q53ET0 693 aaPredicted RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 GNASQ5JWF2 1037 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 ANKRD20A2Q5SQ80 823 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 TMCO4Q5TGY1 634 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 ANKRD20A1Q5TYW2 823 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 ANKRD20A3Q5VUR7 823 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 SPOCD1Q6ZMY3 1216 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 BBS12Q6ZW61 710 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 NLRX1Q86UT6 975 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 CEP57Q86XR8 500 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 FBXO16Q8IX29 292 aaPredicted RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP7.19□□□□□ -1.26
UBR4-212ENST00000475973 WDTC1Q8N5D0 677 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 BANPQ8N9N5 519 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 ZNF511Q8NB15 262 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 KLHDC9Q8NEP7 349 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 UHMK1Q8TAS1 419 aaKnown RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 ASAP3Q8TDY4 903 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 STK32AQ8WU08 396 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 POMGNT1Q8WZA1 660 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 ZNF75CPQ92670 426 aaPredicted RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 RSRC1Q96IZ7 334 aaKnown RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 FGD4Q96M96 766 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 PWWP2AQ96N64 755 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 SCLT1Q96NL6 688 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 RAB3IPQ96QF0 476 aaPredicted RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 CGRRF1Q99675 332 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 TUBB6Q9BUF5 446 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 NIFKQ9BYG3 293 aaKnown RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 SEZ6LQ9BYH1 1024 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 PITPNM3Q9BZ71 974 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 MMADHCQ9H3L0 296 aaPredicted RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 DHX33Q9H6R0 707 aaKnown RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 ACSS3Q9H6R3 686 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 KCNK13Q9HB14 408 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 KMT5AQ9NQR1 393 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 SEPT11Q9NVA2 429 aaKnown RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 PARVAQ9NVD7 372 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 DDX56Q9NY93 547 aaKnown RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 NKIRAS1Q9NYS0 192 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 DNPEPQ9ULA0 475 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.19□□□□□ -1.26
UBR4-212ENST00000475973 PCDHA10Q9Y5I2 948 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 PTPRJQ12913 1337 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 WDR81Q562E7 1941 aa7.19□□□□□ -1.26
UBR4-212ENST00000475973 DOCK5Q9H7D0 1870 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 TRIM43BA6NCK2 446 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 MYADML2A6NDP7 307 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 A8MUI8 341 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 FOXO6A8MYZ6 492 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 SPATA31C2B4DYI2 1134 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 RASA4BC9J798 803 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 ARVCFO00192 962 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 TM9SF1O15321 606 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 RASA4O43374 803 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 CSDE1O75534 798 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 TJP3O95049 919 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 NPTXRO95502 500 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 LDHAP00338 332 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 ATP5BP06576 529 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 ACADSP16219 412 aa7.18□□□□□ -1.26
UBR4-212ENST00000475973 PECAM1P16284 738 aaPredicted RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 ATP2A2P16615 1042 aaKnown RBP7.18□□□□□ -1.26
UBR4-212ENST00000475973 ATP4AP20648 1035 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms