RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 DCAF6Q58WW2 860 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 NDUFAF5Q5TEU4 345 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 PLEKHA7Q6IQ23 1121 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 H2AFVQ71UI9 128 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 BNIPLQ7Z465 357 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 FAM124AQ86V42 546 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 EPHX4Q8IUS5 362 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ARHGAP24Q8N264 748 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 FIBCD1Q8N539 461 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ESX1Q8N693 406 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ALKBH8Q96BT7 664 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 DNAJC1Q96KC8 554 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 FAM81BQ96LP2 452 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 COG8Q96MW5 612 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 PITPNM3Q9BZ71 974 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 KLHL4Q9C0H6 718 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ARMC1Q9NVT9 282 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 PAK1IP1Q9NWT1 392 aaPredicted RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 ANKMY1Q9P2S6 941 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 SUCOQ9UBS9 1254 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 TAGLN3Q9UI15 199 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 ANGPTL2Q9UKU9 493 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 AMFRQ9UKV5 643 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 PSMD13Q9UNM6 376 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 POMPQ9Y244 141 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 IFT52Q9Y366 437 aa4.29□□□□□ -1.72
USP16-205ENST00000474835 HBS1LQ9Y450 684 aaKnown RBP4.29□□□□□ -1.72
USP16-205ENST00000474835 CEP104O60308 925 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 NMT2O60551 498 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 BCAS2O75934 225 aaPredicted RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 FKBP9O95302 570 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 OXSR1O95747 527 aaPredicted RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 EGFRP00533 1210 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 HTR1AP08908 422 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 BMP2P12643 396 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 COMTP21964 271 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 MZF1P28698 734 aaPredicted RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 RFC4P35249 363 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 MLH1P40692 756 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ADARB1P78563 741 aaKnown RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 KLHL30Q0D2K2 578 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 NCOA4Q13772 614 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 LRRC14Q15048 493 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 MOGQ16653 247 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 TEDDM1Q5T9Z0 273 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ANGEL2Q5VTE6 544 aaKnown RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 CIAPIN1Q6FI81 312 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 SEPT14Q6ZU15 432 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 INTS8Q75QN2 995 aaKnown RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 ARCQ7LC44 396 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 PRSS48Q7RTY5 328 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ZFPM1Q8IX07 1006 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 IQCF2Q8IXL9 164 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ARFGAP1Q8N6T3 406 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 GDPD5Q8WTR4 605 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ISOC1Q96CN7 298 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 DCUN1D1Q96GG9 259 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 APOPT1Q96IL0 206 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 AGPAT1Q99943 283 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 GPATCH1Q9BRR8 931 aaKnown RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 ANO3Q9BYT9 981 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 RETREG1Q9H6L5 497 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 FBXO6Q9NRD1 293 aaPredicted RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 ARHGEF38Q9NXL2 777 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 SLC17A7Q9P2U7 560 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 APEX2Q9UBZ4 518 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 PPP1R1BQ9UD71 204 aaPredicted RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 ABCF2Q9UG63 623 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 CDH22Q9UJ99 828 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 APPL1Q9UKG1 709 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 XIRP2A4UGR9 3374 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 TTC24A2A3L6 582 aaPredicted RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 TMX2-CTNND1H3BSU7 103 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 FCHO1O14526 889 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 SHOXO15266 292 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 TIMM44O43615 452 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 MED24O75448 989 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 IDH1O75874 414 aaKnown RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 CDK14O94921 469 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 SBK3P0C264 359 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 MYBL1P10243 752 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 M6PRP20645 277 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 POLR2BP30876 1174 aaKnown RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 MCM7P33993 719 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 FMO5P49326 533 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 SNRPFP62306 86 aaKnown RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 SHROOM1Q2M3G4 852 aaPredicted RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 SLC36A3Q495N2 470 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ZBED5Q49AG3 693 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 INTS11Q5TA45 600 aaKnown RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 FYB2Q5VWT5 728 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 VASH1Q7L8A9 365 aaPredicted RBP4.28□□□□□ -1.72
USP16-205ENST00000474835 CADM3Q8N126 398 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ATP11CQ8NB49 1132 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 SLC2A14Q8TDB8 520 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 DDI1Q8WTU0 396 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 KLHL32Q96NJ5 620 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 TMEM120AQ9BXJ8 343 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 BCAS3Q9H6U6 928 aa4.28□□□□□ -1.72
USP16-205ENST00000474835 ZNF408Q9H9D4 720 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms