RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 CKAP4Q07065 602 aaKnown RBP6.95□□□□□ -1.3
ATG4A-207ENST00000474825 GPR17Q13304 367 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 CLUL1Q15846 466 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 NFE2Q16621 373 aaPredicted RBP6.95□□□□□ -1.3
ATG4A-207ENST00000474825 CCDC142Q17RM4 750 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 PAN2Q504Q3 1202 aaKnown RBP6.95□□□□□ -1.3
ATG4A-207ENST00000474825 EFHC1Q5JVL4 640 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 TMEM240Q5SV17 173 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 CYP4A22Q5TCH4 519 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 SLC8B1Q6J4K2 584 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 TRNP1Q6NT89 227 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 VSTM1Q6UX27 236 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 C4orf50Q6ZRC1 276 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 FAM183BPQ6ZVS7 135 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 ANKS3Q6ZW76 656 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 BHLHA9Q7RTU4 235 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 TMEM173Q86WV6 379 aaPredicted RBP6.95□□□□□ -1.3
ATG4A-207ENST00000474825 CPNE8Q86YQ8 564 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 KATNAL2Q8IYT4 538 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 C7orf61Q8IZ16 206 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 SLC39A11Q8N1S5 342 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 MMGT1Q8N4V1 131 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 LRRN4CLQ8ND94 238 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 MNS1Q8NEH6 495 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 SPATA4Q8NEY3 305 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 JOSD2Q8TAC2 188 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 PHOSPHO2Q8TCD6 241 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 C2orf15Q8WU43 125 aaKnown RBP6.95□□□□□ -1.3
ATG4A-207ENST00000474825 PIK3R5Q8WYR1 880 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 IRGQQ8WZA9 623 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 HERVK_113Q902F9 699 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 KRT35Q92764 455 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 CLP1Q92989 425 aaKnown RBP6.95□□□□□ -1.3
ATG4A-207ENST00000474825 MYLPFQ96A32 169 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 SMARCD1Q96GM5 515 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 IGSF21Q96ID5 467 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 PIWIL1Q96J94 861 aaKnown RBP6.95□□□□□ -1.3
ATG4A-207ENST00000474825 CEP295NLQ96MC4 621 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 MCEEQ96PE7 176 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 SLC2A13Q96QE2 648 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 TMEM209Q96SK2 561 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.95□□□□□ -1.3
ATG4A-207ENST00000474825 CNPY3Q9BT09 278 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 DDX23Q9BUQ8 820 aaKnown RBP6.95□□□□□ -1.3
ATG4A-207ENST00000474825 SELENOOQ9BVL4 669 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 VN1R3Q9BXE9 311 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 CNGB3Q9NQW8 809 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 HSFX1Q9UBD0 423 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 MTRRQ9UBK8 725 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 STK39Q9UEW8 545 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 PRKAG2Q9UGJ0 569 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 PACSIN2Q9UNF0 486 aaPredicted RBP6.95□□□□□ -1.3
ATG4A-207ENST00000474825 PRG3Q9Y2Y8 225 aaPredicted RBP6.95□□□□□ -1.3
ATG4A-207ENST00000474825 CEP290O15078 2479 aa6.95□□□□□ -1.3
ATG4A-207ENST00000474825 LAMA2P24043 3122 aaKnown RBP6.95□□□□□ -1.3
ATG4A-207ENST00000474825 FNDC1Q4ZHG4 1894 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 TDRD15B5MCY1 1934 aaKnown RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 CTAGE15A4D2H0 777 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 F8VP50 259 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 H7C4K7 107 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 FSCN2O14926 492 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 SART1O43290 800 aaKnown RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 LILRB3O75022 631 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 LRCH4O75427 683 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 AP1G2O75843 785 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 GJB5O95377 273 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 GJB6O95452 261 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 AVPP01185 164 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 FYNP06241 537 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 CTAGE8P0CG41 777 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 LAG3P18627 525 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 GPD1P21695 349 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 CXCR5P32302 372 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 BMP8BP34820 402 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 FLT3P36888 993 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 MARCKSL1P49006 195 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 ALDH7A1P49419 539 aaKnown RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 RGS7P49802 495 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 ARSEP51690 589 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 EPHB4P54760 987 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 RWDD2BP57060 319 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 DAOAP59103 153 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 TAS2R40P59535 323 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 MRPS5P82675 430 aaKnown RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 SLC25A11Q02978 314 aaKnown RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 FPGSQ05932 587 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 EIF4EBP2Q13542 120 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 USP41Q3LFD5 358 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 CCDC14Q49A88 953 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 RTP2Q5QGT7 225 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 FAM171A1Q5VUB5 890 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 OR6B2Q6IFH4 312 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 ZNF280DQ6N043 979 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 CC2D1AQ6P1N0 951 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 PSRC1Q6PGN9 363 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 DCUN1D2Q6PH85 259 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 KCNT2Q6UVM3 1135 aa6.94□□□□□ -1.3
ATG4A-207ENST00000474825 RSPO2Q6UXX9 243 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 CYP4V2Q6ZWL3 525 aaPredicted RBP6.94□□□□□ -1.3
ATG4A-207ENST00000474825 ZNF365Q70YC5 407 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms