RNA–Protein interactions for RNA: ENST00000473854.5

CCDC39-203, Transcript of coiled-coil domain containing 39, humanhuman

TSL 2

Gene CCDC39, Length 487 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-203ENST00000473854 TMPRSS15P98073 1019 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 IL10RAQ13651 578 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 CLUL1Q15846 466 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 DEPDC1Q5TB30 811 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 THEMIS2Q5TEJ8 643 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 PTCHD4Q6ZW05 846 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 KIAA0907Q7Z7F0 614 aaPredicted RBP2.56□□□□□ -2
CCDC39-203ENST00000473854 SKAP1Q86WV1 359 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 FAM90A1Q86YD7 464 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 IZUMO1Q8IYV9 350 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 LINC01465Q8N7H1 131 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 C3orf20Q8ND61 904 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 ELP5Q8TE02 316 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 TNPO1Q92973 898 aaKnown RBP2.56□□□□□ -2
CCDC39-203ENST00000473854 C6orf106Q9H6K1 298 aaPredicted RBP2.56□□□□□ -2
CCDC39-203ENST00000473854 TMEM45AQ9NWC5 275 aa2.56□□□□□ -2
CCDC39-203ENST00000473854 FEZ2Q9UHY8 353 aaPredicted RBP2.56□□□□□ -2
CCDC39-203ENST00000473854 CCDC154A6NI56 674 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 E9PSI1 815 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 K7ESF4 209 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 EPN2O95208 641 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 SERPINB2P05120 415 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 CYP2C9P11712 490 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 APEHP13798 732 aaKnown RBP2.55□□□□□ -2
CCDC39-203ENST00000473854 CD19P15391 556 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 GKP32189 559 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 PHKA1P46020 1223 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 P2RX3P56373 397 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 PPATQ06203 517 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 LMAN2Q12907 356 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 SEC23BQ15437 767 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 FAM110CQ1W6H9 321 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 WASHC2DQ5SRD0 308 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 RBM23Q86U06 439 aaKnown RBP2.55□□□□□ -2
CCDC39-203ENST00000473854 HIC2Q96JB3 615 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 CDCP1Q9H5V8 836 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 LIMCH1Q9UPQ0 1083 aa2.55□□□□□ -2
CCDC39-203ENST00000473854 ERI2A8K979 691 aaKnown RBP2.54□□□□□ -2
CCDC39-203ENST00000473854 F8W810 466 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 INPPL1O15357 1258 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 SLC16A6O15403 523 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 TLX3O43711 291 aaPredicted RBP2.54□□□□□ -2
CCDC39-203ENST00000473854 TBC1D4O60343 1298 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 PMPCBO75439 489 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 NDUFB8O95169 186 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 PAPSS2O95340 614 aaPredicted RBP2.54□□□□□ -2
CCDC39-203ENST00000473854 UMODP07911 640 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 XRCC6P12956 609 aaKnown RBP eCLIP2.54□□□□□ -2
CCDC39-203ENST00000473854 PKMP14618 531 aaKnown RBP2.54□□□□□ -2
CCDC39-203ENST00000473854 PSG6Q00889 435 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 KLF1Q13351 362 aaPredicted RBP2.54□□□□□ -2
CCDC39-203ENST00000473854 STAT4Q14765 748 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 PTGR1Q14914 329 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 C3orf36Q3SXR2 165 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 AWAT1Q58HT5 328 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 DCAF12L1Q5VU92 463 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 FAM57BQ71RH2 274 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 SRGAP1Q7Z6B7 1085 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 MORC1Q86VD1 984 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 ABRAQ8N0Z2 381 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 TMEM199Q8N511 208 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 SLC44A5Q8NCS7 719 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 NGDNQ8NEJ9 315 aaKnown RBP2.54□□□□□ -2
CCDC39-203ENST00000473854 MAFAQ8NHW3 353 aaPredicted RBP2.54□□□□□ -2
CCDC39-203ENST00000473854 KAT5Q92993 513 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 C1orf43Q9BWL3 253 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 TM6SF1Q9BZW5 370 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 CAAP1Q9H8G2 361 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 RMI1Q9H9A7 625 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 FZD3Q9NPG1 666 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 TUBD1Q9UJT1 453 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 PLEKHM1Q9Y4G2 1056 aa2.54□□□□□ -2
CCDC39-203ENST00000473854 A0A0B4J293 547 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 DENND3A2RUS2 1198 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 TMPRSS11DO60235 418 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 PRKD3O94806 890 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 CSF1RP07333 972 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 HOXB2P14652 356 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 TAF6P49848 677 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 SLC12A2P55011 1212 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 ERVK-21P61565 698 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 YPEL5P62699 121 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 POU3F1Q03052 451 aaPredicted RBP2.53□□□□□ -2
CCDC39-203ENST00000473854 MLC1Q15049 377 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 PFKFB3Q16875 520 aaPredicted RBP2.53□□□□□ -2
CCDC39-203ENST00000473854 MGAT5BQ3V5L5 792 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 DPY19L3Q6ZPD9 716 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 SPATS2Q86XZ4 545 aaKnown RBP2.53□□□□□ -2
CCDC39-203ENST00000473854 PHF21BQ96EK2 531 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 FAM167AQ96KS9 214 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 SEZ6LQ9BYH1 1024 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 MRPL46Q9H2W6 279 aaKnown RBP2.53□□□□□ -2
CCDC39-203ENST00000473854 ZNF556Q9HAH1 456 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 HIF1ANQ9NWT6 349 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 PLK2Q9NYY3 685 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 PCDHA12Q9UN75 941 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 PCDHGB1Q9Y5G3 927 aa2.53□□□□□ -2
CCDC39-203ENST00000473854 TMEM272A0A1B0GTI8 110 aa2.52□□□□□ -2.01
CCDC39-203ENST00000473854 EDNRBP24530 442 aa2.52□□□□□ -2.01
CCDC39-203ENST00000473854 ART1P52961 327 aa2.52□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms