RNA–Protein interactions for RNA: ENST00000473684.5

TMEM39A-206, Transcript of transmembrane protein 39A, humanhuman

TSL 5

Gene TMEM39A, Length 3,043 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-206ENST00000473684 SCAF8Q9UPN6 1271 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 RABGAP1Q9Y3P9 1069 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 N4BP2Q86UW6 1770 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 MYH1P12882 1939 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 PVALEFA0A1B0GWK0 134 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 A0A1W2PQ67 120 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 F8W8V4 182 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 DDX3XO00571 662 aaKnown RBP eCLIP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 MCF2LO15068 1137 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 FOXD2O60548 495 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 KRT36O76013 467 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 CRYZL1O95825 349 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 CHEK2O96017 543 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 PCP11498 1178 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 HOXD13P35453 343 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 NEK3P51956 506 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 CHN2P52757 468 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 NUP107P57740 925 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 CDR2Q01850 454 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 GRIN1Q05586 938 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 COG2Q14746 738 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 EPHA7Q15375 998 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 INSCQ1MX18 579 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 CERKLQ49MI3 558 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 TTC39AQ5SRH9 613 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 TMEM63BQ5T3F8 832 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 OTUD7BQ6GQQ9 843 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 LETMD1Q6P1Q0 360 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 CCBE1Q6UXH8 406 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 RFPL4BQ6ZWI9 263 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ECHDC2Q86YB7 292 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 MMAAQ8IVH4 418 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ATP6V0D2Q8N8Y2 350 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 CHPT1Q8WUD6 406 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 BORCS5Q969J3 196 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 AIFM3Q96NN9 605 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 LRRC37BQ96QE4 947 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 UBL7Q96S82 380 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 MKRN2Q9H000 416 aaKnown RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 MYLK2Q9H1R3 596 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 EHD1Q9H4M9 534 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 C10orf88Q9H8K7 445 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 NHEJ1Q9H9Q4 299 aaPredicted RBP5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ECHDC1Q9NTX5 307 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 USP40Q9NVE5 1235 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 TMEM59LQ9UK28 342 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 ZNF652Q9Y2D9 606 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 DNAJC16Q9Y2G8 782 aa5.37□□□□□ -1.55
TMEM39A-206ENST00000473684 CPDO75976 1380 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 GAKO14976 1311 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CNTNAP5Q8WYK1 1306 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 PJA2O43164 708 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 TSPAN9O75954 239 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 SLITRK5O94991 958 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 OR6B1O95007 311 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 ZWINTO95229 277 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 ITGAVP06756 1048 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 ABCB1P08183 1280 aaPredicted RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CTRB1P17538 263 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 DDX5P17844 614 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CD247P20963 164 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 IL32P24001 234 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 L1CAMP32004 1257 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 EPS15P42566 896 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 IFNAR2P48551 515 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 NOP14P78316 857 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CDONQ4KMG0 1287 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 SGO2Q562F6 1265 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 BTBD8Q5XKL5 378 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CTRB2Q6GPI1 263 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 ADGRG6Q86SQ4 1221 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 ZNF227Q86WZ6 799 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 C7orf61Q8IZ16 206 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 ELMOD1Q8N336 334 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 OSCP1Q8WVF1 389 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CKAP2Q8WWK9 683 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 SEC14L1Q92503 715 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 LPIN2Q92539 896 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CDKL2Q92772 493 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 TMA16Q96EY4 203 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 COG3Q96JB2 828 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CCDC138Q96M89 665 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 INPP4AQ96PE3 977 aaPredicted RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 NOX5Q96PH1 765 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 MIPEPQ99797 713 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 MRPS26Q9BYN8 205 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 LRRC27Q9C0I9 530 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 MTFR1LQ9H019 292 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 KIAA1683Q9H0B3 1180 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 GPR108Q9NPR9 543 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 MRGBPQ9NV56 204 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 CNOT7Q9UIV1 285 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 TSPYL4Q9UJ04 414 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 HAO1Q9UJM8 370 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 USP21Q9UK80 565 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 ASAP1Q9ULH1 1129 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 MAFFQ9ULX9 164 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 DIS3Q9Y2L1 958 aaKnown RBP5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 DAGLAQ9Y4D2 1042 aa5.36□□□□□ -1.55
TMEM39A-206ENST00000473684 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 145.3 ms