RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 CACNA2D1P54289 1103 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 SOX10P56693 466 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 SUMO2P61956 95 aaKnown RBP5.54□□□□□ -1.52
CDHR3-208ENST00000471910 BIRC2Q13490 618 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 KCNAB1Q14722 419 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 PRR16Q569H4 304 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 FAXCQ5TGI0 409 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 STRIP1Q5VSL9 837 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 MTHFD1LQ6UB35 978 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 TOGARAM2Q6ZUX3 1019 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 SYTL1Q8IYJ3 562 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 GPR150Q8NGU9 434 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 ZBTB45Q96K62 511 aaPredicted RBP5.54□□□□□ -1.52
CDHR3-208ENST00000471910 TRIM36Q9NQ86 728 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 TM7SF3Q9NS93 570 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 GJB4Q9NTQ9 266 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 FNIP2Q9P278 1114 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 NKX1-2Q9UD57 310 aaPredicted RBP5.54□□□□□ -1.52
CDHR3-208ENST00000471910 ZNHIT2Q9UHR6 403 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 ST3GAL5Q9UNP4 418 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 LRCH1Q9Y2L9 728 aa5.54□□□□□ -1.52
CDHR3-208ENST00000471910 LMNAP02545 664 aaKnown RBP5.53□□□□□ -1.52
CDHR3-208ENST00000471910 NPSP0C0P6 89 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 TYRP1P17643 537 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 TECP42680 631 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 TIRAPP58753 221 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 TIAL1Q01085 375 aaKnown RBP eCLIP5.53□□□□□ -1.52
CDHR3-208ENST00000471910 MORC3Q14149 939 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 SLC35G1Q2M3R5 365 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 AARS2Q5JTZ9 985 aaKnown RBP5.53□□□□□ -1.52
CDHR3-208ENST00000471910 MANEALQ5VSG8 457 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 DENND2CQ68D51 928 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 ZNF804AQ7Z570 1209 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 SIRT6Q8N6T7 355 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 SIMC1Q8NDZ2 872 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 NGDNQ8NEJ9 315 aaKnown RBP5.53□□□□□ -1.52
CDHR3-208ENST00000471910 ABHD11Q8NFV4 315 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 KIAA1191Q96A73 305 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 ZDHHC12Q96GR4 267 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 KRTAP4-7Q9BYR0 210 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 SLC25A32Q9H2D1 315 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 PCDHGB2Q9Y5G2 931 aa5.53□□□□□ -1.52
CDHR3-208ENST00000471910 M0R3H8 397 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 KCNQ3O43525 872 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 ERBB2P04626 1255 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 ENGP17813 658 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 ABCB4P21439 1286 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 HSPA7P48741 367 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 EEFSECP57772 596 aaKnown RBP5.52□□□□□ -1.53
CDHR3-208ENST00000471910 PCID2Q5JVF3 399 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 TSTD2Q5T7W7 516 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 MRNIPQ6NTE8 343 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 XRRA1Q6P2D8 792 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 C1orf228Q6PIY5 440 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 CRTC1Q6UUV9 634 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 Q6ZWC4 215 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 ABHD5Q8WTS1 349 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 UROC1Q96N76 676 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 RPS6KC1Q96S38 1066 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 AGAP2Q99490 1192 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.52□□□□□ -1.53
CDHR3-208ENST00000471910 DUSP22Q9NRW4 184 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 DLL3Q9NYJ7 618 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 STEAP1Q9UHE8 339 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 ENTPD2Q9Y5L3 495 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 COMMD10Q9Y6G5 202 aa5.52□□□□□ -1.53
CDHR3-208ENST00000471910 EXOC5O00471 708 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 PODXLO00592 558 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 KIAA0355O15063 1070 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 ADAMTS3O15072 1205 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 PMPCBO75439 489 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 VNN1O95497 513 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 NDST3O95803 873 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 SERPINB3P29508 390 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 GKP32189 559 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 STARD3Q14849 445 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 MPEG1Q2M385 716 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 EEF1AKMT2Q5JPI9 291 aaKnown RBP5.51□□□□□ -1.53
CDHR3-208ENST00000471910 CLEC9AQ6UXN8 241 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 SLC29A4Q7RTT9 530 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 RASAL3Q86YV0 1011 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 MYLK4Q86YV6 388 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-208ENST00000471910 FSTL5Q8N475 847 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-208ENST00000471910 CYP2W1Q8TAV3 490 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 TBC1D5Q92609 795 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 VPS50Q96JG6 964 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 TIMP4Q99727 224 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 PCDHAC1Q9H158 963 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 RIOX1Q9H6W3 641 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 CPNE5Q9HCH3 593 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 PLCB1Q9NQ66 1216 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 RGL1Q9NZL6 768 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 AMFRQ9UKV5 643 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 ZMYND8Q9ULU4 1186 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-208ENST00000471910 GABRQQ9UN88 632 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 MAGED2Q9UNF1 606 aaPredicted RBP5.51□□□□□ -1.53
CDHR3-208ENST00000471910 DAAM1Q9Y4D1 1078 aa5.51□□□□□ -1.53
CDHR3-208ENST00000471910 FAM234BA2RU67 622 aa5.5□□□□□ -1.53
CDHR3-208ENST00000471910 H0YIZ8 118 aa5.5□□□□□ -1.53
CDHR3-208ENST00000471910 AP4M1O00189 453 aa5.5□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms