RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 C7orf26Q96N11 449 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 ACAD9Q9H845 621 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 UNKLQ9H9P5 680 aaKnown RBP7.5□□□□□ -1.21
SMC5-202ENST00000471372 SMYD2Q9NRG4 433 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 CTTNBP2NLQ9P2B4 639 aa7.5□□□□□ -1.21
SMC5-202ENST00000471372 AATKQ6ZMQ8 1374 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 MROH6A6NGR9 719 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 FAM90A20PA6NIJ5 464 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 B4GALT3O60512 393 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 SUN1O94901 812 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 CER1O95813 267 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 CR2P20023 1033 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 MAN2A2P49641 1150 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 RBM5P52756 815 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMC5-202ENST00000471372 CAP1Q01518 475 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMC5-202ENST00000471372 PDCLQ13371 301 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 ARHGAP40Q5TG30 622 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 FAM205BPQ63HN1 556 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 METRNLQ641Q3 311 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.49□□□□□ -1.21
SMC5-202ENST00000471372 HMGB4Q8WW32 186 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 HIST1H2AAQ96QV6 131 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 MECRQ9BV79 373 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 NDUFAF4Q9P032 175 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 NDRG4Q9ULP0 352 aaKnown RBP7.49□□□□□ -1.21
SMC5-202ENST00000471372 TBX20Q9UMR3 447 aa7.49□□□□□ -1.21
SMC5-202ENST00000471372 EFCAB8A8MWE9 144 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 CCER2I3L3R5 266 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 ZBED4O75132 1171 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 CSF1RP07333 972 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 MGAT1P26572 445 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 PGDP52209 483 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 GALNT2Q10471 571 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 ANKRD1Q15327 319 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 TSHZ3Q63HK5 1081 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 RGS7BPQ6MZT1 257 aaPredicted RBP7.48□□□□□ -1.21
SMC5-202ENST00000471372 MFSD5Q6N075 450 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 CHD1LQ86WJ1 897 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 MB21D1Q8N884 522 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 MBD3L2Q8NHZ7 208 aaPredicted RBP7.48□□□□□ -1.21
SMC5-202ENST00000471372 RNF125Q96EQ8 232 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 ZDHHC12Q96GR4 267 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 RSRC1Q96IZ7 334 aaKnown RBP7.48□□□□□ -1.21
SMC5-202ENST00000471372 ZNF668Q96K58 619 aaPredicted RBP7.48□□□□□ -1.21
SMC5-202ENST00000471372 WDR24Q96S15 920 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 PNKPQ96T60 521 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 PTDSS2Q9BVG9 487 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 PRKRIP1Q9H875 184 aaPredicted RBP7.48□□□□□ -1.21
SMC5-202ENST00000471372 USP22Q9UPT9 525 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 CLCA2Q9UQC9 943 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 CNPY2Q9Y2B0 182 aa7.48□□□□□ -1.21
SMC5-202ENST00000471372 VWA3AA6NCI4 1184 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 SPTLC2O15270 562 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 TFRCP02786 760 aaKnown RBP7.47□□□□□ -1.21
SMC5-202ENST00000471372 JUNBP17275 347 aaPredicted RBP7.47□□□□□ -1.21
SMC5-202ENST00000471372 ITGALP20701 1170 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 ADORA2AP29274 412 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 UQCRC1P31930 480 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 RAD52P43351 418 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 KCNC1P48547 511 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 CCT4P50991 539 aaKnown RBP7.47□□□□□ -1.21
SMC5-202ENST00000471372 ATXN1P54253 815 aaKnown RBP7.47□□□□□ -1.21
SMC5-202ENST00000471372 CSHL1Q14406 222 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 MEA1Q16626 185 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 MSANTD2Q6P1R3 559 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 PDXDC1Q6P996 788 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 TTC30AQ86WT1 665 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 LRRC37BQ96QE4 947 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 SDF4Q9BRK5 362 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 NUDT22Q9BRQ3 303 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 TTPALQ9BTX7 342 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 PLA2G12BQ9BX93 195 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 HECAQ9UBI9 543 aaPredicted RBP7.47□□□□□ -1.21
SMC5-202ENST00000471372 HSF4Q9ULV5 492 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 GPR34Q9UPC5 381 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 KCTD3Q9Y597 815 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 CYP46A1Q9Y6A2 500 aa7.47□□□□□ -1.21
SMC5-202ENST00000471372 TOR1BO14657 336 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 TMCC2O75069 709 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 CSF1P09603 554 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 ABCD3P28288 659 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 HTR7P34969 479 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 ZEB1P37275 1124 aaPredicted RBP7.46□□□□□ -1.22
SMC5-202ENST00000471372 SF3A3Q12874 501 aaKnown RBP eCLIP7.46□□□□□ -1.22
SMC5-202ENST00000471372 ERV3-1Q14264 604 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 GRM7Q14831 915 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 ELAVL1Q15717 326 aaKnown RBP7.46□□□□□ -1.22
SMC5-202ENST00000471372 CTXN3Q4LDR2 81 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 CERCAMQ5T4B2 595 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 FAM102AQ5T9C2 384 aaPredicted RBP7.46□□□□□ -1.22
SMC5-202ENST00000471372 DGAT2L7PQ6IED9 249 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 BRINP3Q76B58 766 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 TMPRSS9Q7Z410 1059 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 TRABD2AQ86V40 505 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 SLC15A3Q8IY34 581 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 MDGA1Q8NFP4 955 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 TBC1D22AQ8WUA7 517 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 STAMQ92783 540 aa7.46□□□□□ -1.22
SMC5-202ENST00000471372 TREX2Q9BQ50 279 aaPredicted RBP7.46□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms