RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 POLR3BQ9NW08 1133 aaPredicted RBP33.22■■■□□ 2.91
HMG20B-209ENST00000470356 CFAP97Q9P2B7 532 aa33.22■■■□□ 2.91
HMG20B-209ENST00000470356 CHORDC1Q9UHD1 332 aaPredicted RBP33.22■■■□□ 2.91
HMG20B-209ENST00000470356 MAPK8IP1Q9UQF2 711 aa33.22■■■□□ 2.91
HMG20B-209ENST00000470356 AP1G2O75843 785 aa33.21■■■□□ 2.91
HMG20B-209ENST00000470356 AKAP3O75969 853 aa33.21■■■□□ 2.91
HMG20B-209ENST00000470356 ZNF202O95125 648 aa33.21■■■□□ 2.91
HMG20B-209ENST00000470356 MBL2P11226 248 aaPredicted RBP33.21■■■□□ 2.91
HMG20B-209ENST00000470356 OPRD1P41143 372 aa33.21■■■□□ 2.91
HMG20B-209ENST00000470356 PIK3CAP42336 1068 aa33.21■■■□□ 2.91
HMG20B-209ENST00000470356 ASPAP45381 313 aa33.21■■■□□ 2.91
HMG20B-209ENST00000470356 GAB4Q2WGN9 574 aa33.21■■■□□ 2.91
HMG20B-209ENST00000470356 INTS8Q75QN2 995 aaKnown RBP33.21■■■□□ 2.91
HMG20B-209ENST00000470356 KRT82Q9NSB4 513 aa33.21■■■□□ 2.91
HMG20B-209ENST00000470356 GTF3C3Q9Y5Q9 886 aa33.21■■■□□ 2.91
HMG20B-209ENST00000470356 FAM92AA1XBS5 289 aa33.2■■■□□ 2.91
HMG20B-209ENST00000470356 RPP40O75818 363 aaKnown RBP33.2■■■□□ 2.91
HMG20B-209ENST00000470356 CYP17A1P05093 508 aa33.2■■■□□ 2.91
HMG20B-209ENST00000470356 RPL13P26373 211 aaKnown RBP33.2■■■□□ 2.91
HMG20B-209ENST00000470356 SLC5A3P53794 718 aa33.2■■■□□ 2.91
HMG20B-209ENST00000470356 ENPEPQ07075 957 aa33.2■■■□□ 2.91
HMG20B-209ENST00000470356 HECTD3Q5T447 861 aa33.2■■■□□ 2.91
HMG20B-209ENST00000470356 SPOPLQ6IQ16 392 aa33.2■■■□□ 2.91
HMG20B-209ENST00000470356 ACDQ96AP0 544 aa33.2■■■□□ 2.91
HMG20B-209ENST00000470356 SEMA4GQ9NTN9 838 aa33.2■■■□□ 2.91
HMG20B-209ENST00000470356 HMGXB4Q9UGU5 601 aa33.2■■■□□ 2.91
HMG20B-209ENST00000470356 CDV3Q9UKY7 258 aaKnown RBP33.2■■■□□ 2.91
HMG20B-209ENST00000470356 CCDC130P13994 396 aa33.19■■■□□ 2.9
HMG20B-209ENST00000470356 ZMIZ2Q8NF64 920 aa33.19■■■□□ 2.9
HMG20B-209ENST00000470356 SLC2A14Q8TDB8 520 aa33.19■■■□□ 2.9
HMG20B-209ENST00000470356 SMOQ99835 787 aa33.19■■■□□ 2.9
HMG20B-209ENST00000470356 CSNK1G1Q9HCP0 422 aa33.19■■■□□ 2.9
HMG20B-209ENST00000470356 COCHO43405 550 aa33.18■■■□□ 2.9
HMG20B-209ENST00000470356 ZDHHC11BP0C7U3 371 aa33.18■■■□□ 2.9
HMG20B-209ENST00000470356 TUBP50607 506 aa33.18■■■□□ 2.9
HMG20B-209ENST00000470356 ATXN1P54253 815 aaKnown RBP33.18■■■□□ 2.9
HMG20B-209ENST00000470356 ORC1Q13415 861 aa33.18■■■□□ 2.9
HMG20B-209ENST00000470356 DHCR24Q15392 516 aa33.18■■■□□ 2.9
HMG20B-209ENST00000470356 CSRP2Q16527 193 aa33.18■■■□□ 2.9
HMG20B-209ENST00000470356 CACNA2D4Q7Z3S7 1137 aa33.18■■■□□ 2.9
HMG20B-209ENST00000470356 FAM186BQ8IYM0 893 aa33.18■■■□□ 2.9
HMG20B-209ENST00000470356 HHIPQ96QV1 700 aa33.18■■■□□ 2.9
HMG20B-209ENST00000470356 IMPG2Q9BZV3 1241 aa33.18■■■□□ 2.9
HMG20B-209ENST00000470356 TBC1D14Q9P2M4 693 aa33.18■■■□□ 2.9
HMG20B-209ENST00000470356 E2F8A0AVK6 867 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 BEST1O76090 585 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 TRIM49P0CI25 452 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 TRIM49CP0CI26 452 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 KRT13P13646 458 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 PSMC2P35998 433 aaKnown RBP33.17■■■□□ 2.9
HMG20B-209ENST00000470356 GCLMP48507 274 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 PPP3CAQ08209 521 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 INCA1Q0VD86 236 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 ADAM9Q13443 819 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 DMC1Q14565 340 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 C12orf29Q8N999 325 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 LOXL4Q96JB6 756 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 ZFRQ96KR1 1074 aaKnown RBP33.17■■■□□ 2.9
HMG20B-209ENST00000470356 CYP3A43Q9HB55 503 aa33.17■■■□□ 2.9
HMG20B-209ENST00000470356 DYNC1LI1Q9Y6G9 523 aaKnown RBP33.17■■■□□ 2.9
HMG20B-209ENST00000470356 MYO18AQ92614 2054 aaKnown RBP33.16■■■□□ 2.9
HMG20B-209ENST00000470356 MED19A0JLT2 244 aaPredicted RBP33.16■■■□□ 2.9
HMG20B-209ENST00000470356 K7EQS6 105 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 SCAMP3O14828 347 aaKnown RBP33.16■■■□□ 2.9
HMG20B-209ENST00000470356 AXIN1O15169 862 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 TRIM21P19474 475 aaKnown RBP33.16■■■□□ 2.9
HMG20B-209ENST00000470356 MCCD1P59942 119 aaPredicted RBP33.16■■■□□ 2.9
HMG20B-209ENST00000470356 ZCWPW2Q504Y3 356 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 RHBDF2Q6PJF5 856 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 TAS1R2Q8TE23 839 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 USP33Q8TEY7 942 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 CCDC34Q96HJ3 373 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 FBXO44Q9H4M3 255 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 CCSER2Q9H7U1 834 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 GDPD2Q9HCC8 539 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 FAM49BQ9NUQ9 324 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 GMIPQ9P107 970 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 EBF1Q9UH73 591 aa33.16■■■□□ 2.9
HMG20B-209ENST00000470356 CNOT1A5YKK6 2376 aaKnown RBP33.15■■■□□ 2.9
HMG20B-209ENST00000470356 FOXD2O60548 495 aaPredicted RBP33.15■■■□□ 2.9
HMG20B-209ENST00000470356 APBB3O95704 486 aa33.15■■■□□ 2.9
HMG20B-209ENST00000470356 CCDC192P0DO97 292 aa33.15■■■□□ 2.9
HMG20B-209ENST00000470356 HNRNPABQ99729 332 aaKnown RBP33.15■■■□□ 2.9
HMG20B-209ENST00000470356 RTKNQ9BST9 563 aa33.15■■■□□ 2.9
HMG20B-209ENST00000470356 APOBEC3GQ9HC16 384 aaKnown RBP33.15■■■□□ 2.9
HMG20B-209ENST00000470356 UTP3Q9NQZ2 479 aaKnown RBP eCLIP33.15■■■□□ 2.91e-6■■■■■ 46.7
HMG20B-209ENST00000470356 ADH1CP00326 375 aa33.14■■■□□ 2.9
HMG20B-209ENST00000470356 EIF2DP41214 584 aaKnown RBP33.14■■■□□ 2.9
HMG20B-209ENST00000470356 MAP3K7CLP57077 242 aa33.14■■■□□ 2.9
HMG20B-209ENST00000470356 EDRF1Q3B7T1 1238 aa33.14■■■□□ 2.9
HMG20B-209ENST00000470356 PRR23CQ6ZRP0 262 aa33.14■■■□□ 2.9
HMG20B-209ENST00000470356 KBTBD6Q86V97 674 aa33.14■■■□□ 2.9
HMG20B-209ENST00000470356 OTUB2Q96DC9 234 aa33.14■■■□□ 2.9
HMG20B-209ENST00000470356 ZC3H10Q96K80 434 aaKnown RBP33.13■■■□□ 2.89
HMG20B-209ENST00000470356 TWNKQ96RR1 684 aa33.13■■■□□ 2.89
HMG20B-209ENST00000470356 DUSP9Q99956 384 aaKnown RBP33.13■■■□□ 2.89
HMG20B-209ENST00000470356 NT5C1AQ9BXI3 368 aa33.13■■■□□ 2.89
HMG20B-209ENST00000470356 NIF3L1Q9GZT8 377 aa33.13■■■□□ 2.89
HMG20B-209ENST00000470356 TMEM8AQ9HCN3 771 aa33.13■■■□□ 2.89
HMG20B-209ENST00000470356 FAM200BP0CF97 657 aa33.12■■■□□ 2.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms