RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 MSTO1Q9BUK6 570 aa9.53□□□□□ -0.88
SYNGAP1-205ENST00000470232 CCSER1Q9C0I3 900 aa9.53□□□□□ -0.88
SYNGAP1-205ENST00000470232 CLSTN2Q9H4D0 955 aa9.53□□□□□ -0.88
SYNGAP1-205ENST00000470232 TRPM5Q9NZQ8 1165 aa9.53□□□□□ -0.88
SYNGAP1-205ENST00000470232 GCNT4Q9P109 453 aa9.53□□□□□ -0.88
SYNGAP1-205ENST00000470232 LARSQ9P2J5 1176 aaKnown RBP9.53□□□□□ -0.88
SYNGAP1-205ENST00000470232 TBC1D14Q9P2M4 693 aa9.53□□□□□ -0.88
SYNGAP1-205ENST00000470232 PCOLCE2Q9UKZ9 415 aa9.53□□□□□ -0.88
SYNGAP1-205ENST00000470232 KIF3AQ9Y496 699 aa9.53□□□□□ -0.88
SYNGAP1-205ENST00000470232 PTPRBP23467 1997 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 IGHV1OR15-9A0A0B4J2B8 117 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 A0A1B0GTW7 788 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 C2orf78A6NCI8 922 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 GOLGA6L6A8MZA4 724 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 J3QKU1 62 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 LEFTY2O00292 366 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 HNRNPDLO14979 420 aaKnown RBP9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 RRP8O43159 456 aaKnown RBP9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 JAK2O60674 1132 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 HUS1O60921 280 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 ADAM23O75077 832 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 CBFA2T3O75081 653 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 OBSL1O75147 1896 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 TADA3O75528 432 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 CER1O95813 267 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 CYP17A1P05093 508 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZNF883P0CG24 379 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 CYP2F1P24903 491 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 NTSR1P30989 418 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 ABCD1P33897 745 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 GPR15P49685 360 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 ATP2C1P98194 919 aaPredicted RBP9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 GAD2Q05329 585 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 TYRO3Q06418 890 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZC2HC1CQ53FD0 456 aaPredicted RBP9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 SDHAF4Q5VUM1 108 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 FAM173BQ6P4H8 233 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 DDX42Q86XP3 938 aaKnown RBP eCLIP9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 SPATA2LQ8IUW3 424 aaPredicted RBP9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZNF513Q8N8E2 541 aaPredicted RBP9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 RHBDD1Q8TEB9 315 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 CEP295NLQ96MC4 621 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZNF560Q96MR9 790 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 RUSC1Q9BVN2 902 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 ZSCAN16Q9H4T2 348 aaPredicted RBP9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 DPP3Q9NY33 737 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 CALCOCO1Q9P1Z2 691 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 TFIP11Q9UBB9 837 aaKnown RBP9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 C2CD2Q9Y426 696 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 TCHHQ07283 1943 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 PCDH15Q96QU1 1955 aa9.52□□□□□ -0.89
SYNGAP1-205ENST00000470232 CTDNEP1O95476 244 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 ADH5P11766 374 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 HLA-EP13747 358 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 FDPSP14324 419 aaKnown RBP9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 HOXB2P14652 356 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 GABRG2P18507 467 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 CDC25AP30304 524 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 MATKP42679 507 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 FOSBP53539 338 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 SLC7A9P82251 487 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 HMGN5P82970 282 aaKnown RBP9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 GRIK2Q13002 908 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 MAPK7Q13164 816 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 GLIPR1L2Q4G1C9 344 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 DNTTIP2Q5QJE6 756 aaKnown RBP9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 C4orf50Q6ZRC1 276 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 SLC41A1Q8IVJ1 513 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 SCN4BQ8IWT1 228 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 TMEM86AQ8N2M4 240 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 KCTD17Q8N5Z5 321 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 KRI1Q8N9T8 703 aaKnown RBP9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 STKLD1Q8NE28 680 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 PIP4K2CQ8TBX8 421 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 OTUB2Q96DC9 234 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 FUBP3Q96I24 572 aaKnown RBP eCLIP9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 LLPHQ9BRT6 129 aaKnown RBP9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 HAPLN2Q9GZV7 340 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 TNMDQ9H2S6 317 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 PRDM16Q9HAZ2 1276 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 TM7SF3Q9NS93 570 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 TMLHEQ9NVH6 421 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 DDX43Q9NXZ2 648 aaKnown RBP9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 KCND2Q9NZV8 630 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 DEC1Q9P2X7 70 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 CPSF3Q9UKF6 684 aaKnown RBP9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 CYP8B1Q9UNU6 501 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 NFE2L3Q9Y4A8 694 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 PCDHB6Q9Y5E3 794 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 PCDHGB2Q9Y5G2 931 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 NAV2Q8IVL1 2488 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 MYH11P35749 1972 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 GOLGA4Q13439 2230 aaKnown RBP9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 ANK1P16157 1881 aa9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 MYO18AQ92614 2054 aaKnown RBP9.51□□□□□ -0.89
SYNGAP1-205ENST00000470232 A0A0B4J269 797 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 ANTXRLA6NF34 631 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 GOLGA8CPA6NN73 597 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 FLRT2O43155 660 aa9.5□□□□□ -0.89
SYNGAP1-205ENST00000470232 C1QL1O75973 258 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms