RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 PBX4Q9BYU1 374 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 PDCL3Q9H2J4 239 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 CRISPLD1Q9H336 500 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 MRPL47Q9HD33 250 aaKnown RBP8.59□□□□□ -1.03
NPHP3-204ENST00000469232 NGRNQ9NPE2 291 aaKnown RBP8.59□□□□□ -1.03
NPHP3-204ENST00000469232 CNGB3Q9NQW8 809 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 MRPL17Q9NRX2 175 aaKnown RBP8.59□□□□□ -1.03
NPHP3-204ENST00000469232 SEPT11Q9NVA2 429 aaKnown RBP8.59□□□□□ -1.03
NPHP3-204ENST00000469232 PARVAQ9NVD7 372 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 TJP2Q9UDY2 1190 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 CNOT8Q9UFF9 292 aaKnown RBP8.59□□□□□ -1.03
NPHP3-204ENST00000469232 LCMT1Q9UIC8 334 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 CDY1Q9Y6F8 540 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 SCINQ9Y6U3 715 aa8.59□□□□□ -1.03
NPHP3-204ENST00000469232 PLXNA3P51805 1871 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 GRID2IPA4D2P6 1211 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 TMCO5BA8MYB1 307 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 E5RJQ4 531 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 TRIM66O15016 1216 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 TEX28O15482 410 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 FBXO21O94952 628 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 CA3P07451 260 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 POU2F2P09086 479 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 CNPP09543 421 aaKnown RBP8.58□□□□□ -1.04
NPHP3-204ENST00000469232 OR4Q2P0C623 313 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 BDNFP23560 247 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 CYP2F1P24903 491 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 MSNP26038 577 aaKnown RBP8.58□□□□□ -1.04
NPHP3-204ENST00000469232 SSTR3P32745 418 aaPredicted RBP8.58□□□□□ -1.04
NPHP3-204ENST00000469232 CTNNB1P35222 781 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 SLC8A3P57103 927 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 IFI16Q16666 785 aaKnown RBP8.58□□□□□ -1.04
NPHP3-204ENST00000469232 SLC39A12Q504Y0 691 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 ARHGAP29Q52LW3 1261 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 C11orf63Q6NUN7 778 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 RNF19BQ6ZMZ0 732 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 SPRED2Q7Z698 418 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 METTL3Q86U44 580 aaKnown RBP8.58□□□□□ -1.04
NPHP3-204ENST00000469232 CEP57Q86XR8 500 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 SPATA2LQ8IUW3 424 aaPredicted RBP8.58□□□□□ -1.04
NPHP3-204ENST00000469232 ZNF276Q8N554 614 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 ATAD1Q8NBU5 361 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 TRIM58Q8NG06 486 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 NT5C3BQ969T7 300 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 ZNF653Q96CK0 615 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 KCNK16Q96T55 309 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 IRX2Q9BZI1 471 aaPredicted RBP8.58□□□□□ -1.04
NPHP3-204ENST00000469232 GREB1Q4ZG55 1949 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 C2orf71A6NGG8 1288 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 C2CD4BA6NLJ0 364 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 F8VP50 259 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 GRM6O15303 877 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 SART1O43290 800 aaKnown RBP8.58□□□□□ -1.04
NPHP3-204ENST00000469232 ZDHHC11BP0C7U3 371 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 ABCB4P21439 1286 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 OR1D2P34982 312 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 TUFMP49411 452 aaKnown RBP8.58□□□□□ -1.04
NPHP3-204ENST00000469232 MAP3K7CLP57077 242 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 DAOAP59103 153 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 ERVFC1P60507 584 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 SLC6A3Q01959 620 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 ZNF252P-AS1Q0IIN9 211 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 ACAP1Q15027 740 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 KIAA1841Q6NSI8 718 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 FAM183BPQ6ZVS7 135 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 GPRIN1Q7Z2K8 1008 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 FEZF2Q8TBJ5 459 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 ZNF564Q8TBZ8 553 aaPredicted RBP8.58□□□□□ -1.04
NPHP3-204ENST00000469232 IPO4Q8TEX9 1081 aaKnown RBP8.58□□□□□ -1.04
NPHP3-204ENST00000469232 HDAC7Q8WUI4 952 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 CENPIQ92674 756 aaPredicted RBP8.58□□□□□ -1.04
NPHP3-204ENST00000469232 CD101Q93033 1021 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 MYRFLQ96LU7 910 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 KLHL5Q96PQ7 755 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 SLC2A13Q96QE2 648 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 NUP85Q9BW27 656 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 RHOBTB2Q9BYZ6 727 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 OSGEPQ9NPF4 335 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 LZTFL1Q9NQ48 299 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 TLR9Q9NR96 1032 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 GUCA1BQ9UMX6 200 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 CAPN6Q9Y6Q1 641 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 PDE4DIPQ5VU43 2346 aa8.58□□□□□ -1.04
NPHP3-204ENST00000469232 KIF5CO60282 957 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 BUB1BO60566 1050 aaPredicted RBP8.57□□□□□ -1.04
NPHP3-204ENST00000469232 ENDOD1O94919 500 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 SEC24AO95486 1093 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 CXCL14O95715 111 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 FYNP06241 537 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 CPB1P15086 417 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 PTPN9P43378 593 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 RGS7P49802 495 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 RPL7AP62424 266 aaKnown RBP8.57□□□□□ -1.04
NPHP3-204ENST00000469232 RPL10AP62906 217 aaKnown RBP8.57□□□□□ -1.04
NPHP3-204ENST00000469232 MRPS5P82675 430 aaKnown RBP8.57□□□□□ -1.04
NPHP3-204ENST00000469232 OGDHQ02218 1023 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 EIF4EBP2Q13542 120 aaPredicted RBP8.57□□□□□ -1.04
NPHP3-204ENST00000469232 SMC1AQ14683 1233 aaKnown RBP8.57□□□□□ -1.04
NPHP3-204ENST00000469232 LRIT3Q3SXY7 679 aa8.57□□□□□ -1.04
NPHP3-204ENST00000469232 C2CD6Q53TS8 623 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms