RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 MYLPFQ96A32 169 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 LRRC1Q9BTT6 524 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 AP1M1Q9BXS5 423 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 PARD6BQ9BYG5 372 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 ZCWPW1Q9H0M4 648 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 TSPYL1Q9H0U9 437 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 ST7Q9NRC1 585 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 ADAM28Q9UKQ2 775 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 DSEQ9UL01 958 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 PRG3Q9Y2Y8 225 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 CHD7Q9P2D1 2997 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 TBKBP1A7MCY6 615 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 NT5C1B-RDH14C9J2C7 533 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 DPYSL4O14531 572 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 PPP1R12AO14974 1030 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 PSTPIP1O43586 416 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 FGGP02679 453 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 OR4Q2P0C623 313 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 ZNF143P52747 638 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 BCAR1P56945 870 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 MAP3K7CLP57077 242 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 KLF1Q13351 362 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 FAM102AQ5T9C2 384 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 MFSD5Q6N075 450 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 ARCQ7LC44 396 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 KATNAL2Q8IYT4 538 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 CENPIQ92674 756 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 HSFY1Q96LI6 401 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 CFAP57Q96MR6 1250 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 KRT82Q9NSB4 513 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 RAB21Q9UL25 225 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 CHD9Q3L8U1 2897 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 H0YHG0 523 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 PGRMC1O00264 195 aaKnown RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 SPOPO43791 374 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 ARSEP51690 589 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 WDR5P61964 334 aaKnown RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 SARNPP82979 210 aaKnown RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 IKBKEQ14164 716 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 PIGHQ14442 188 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 C15orf59Q2T9L4 293 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 FBXO38Q6PIJ6 1188 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 SLC26A9Q7LBE3 791 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 RPGRIP1Q96KN7 1286 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 TMEM175Q9BSA9 504 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 UBXN6Q9BZV1 441 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 MIS12Q9H081 205 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 RSPH9Q9H1X1 276 aaPredicted RBP8.67□□□□□ -1.02
BRCA1-208ENST00000468300 DONSONQ9NYP3 566 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 HESX1Q9UBX0 185 aa8.67□□□□□ -1.02
BRCA1-208ENST00000468300 MYO16Q9Y6X6 1858 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 TNFRSF10BO14763 440 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 FSCN2O14926 492 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 ACRP10323 421 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 LCP1P13796 627 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 SCNN1AP37088 669 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 EPHB4P54760 987 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 RWDD2BP57060 319 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 RNASELQ05823 741 aaKnown RBP8.66□□□□□ -1.02
BRCA1-208ENST00000468300 TAZQ16635 292 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 RTP2Q5QGT7 225 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 OR6B2Q6IFH4 312 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 HFE2Q6ZVN8 426 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 GPR161Q8N6U8 529 aaKnown RBP8.66□□□□□ -1.02
BRCA1-208ENST00000468300 UBL4BQ8N7F7 174 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 PRELID2Q8N945 189 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 PHC3Q8NDX5 983 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 UHMK1Q8TAS1 419 aaKnown RBP8.66□□□□□ -1.02
BRCA1-208ENST00000468300 RXFP2Q8WXD0 754 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 RAPGEF5Q92565 580 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 UBXN4Q92575 508 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 NT5C3BQ969T7 300 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 IRAK4Q9NWZ3 460 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 DMGDHQ9UI17 866 aaKnown RBP8.66□□□□□ -1.02
BRCA1-208ENST00000468300 KIAA0100Q14667 2235 aaKnown RBP8.66□□□□□ -1.02
BRCA1-208ENST00000468300 PLXNA4Q9HCM2 1894 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 RHOXF2BP0C7M4 288 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 PCSK1P29120 753 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 PGFP49763 221 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 YWHAHQ04917 246 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-208ENST00000468300 ADIGQ0VDE8 80 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 VARS2Q5ST30 1063 aaKnown RBP8.66□□□□□ -1.02
BRCA1-208ENST00000468300 LRRC38Q5VT99 294 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 TTC27Q6P3X3 843 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 DCUN1D2Q6PH85 259 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 ZDHHC17Q8IUH5 632 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 RHOT1Q8IXI2 618 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 ACSF2Q96CM8 615 aaPredicted RBP8.66□□□□□ -1.02
BRCA1-208ENST00000468300 RHOXF2Q9BQY4 288 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 KLHL11Q9NVR0 708 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 ZNF446Q9NWS9 450 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 LRFN2Q9ULH4 789 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 USTQ9Y2C2 406 aa8.66□□□□□ -1.02
BRCA1-208ENST00000468300 ABHD14A-ACY1A0A1B0GW23 586 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 SYN3O14994 580 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 AP1G2O75843 785 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 UPP2O95045 317 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 RARAP10276 462 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 PSMA2P25787 234 aa8.65□□□□□ -1.02
BRCA1-208ENST00000468300 HDAC4P56524 1084 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms