RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 OR1D2P34982 312 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 BMPR1AP36894 532 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 DNA2P51530 1060 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 ARPP19P56211 112 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 RNASE9P60153 205 aaKnown RBP13.64□□□□□ -0.23
COL4A1-202ENST00000467182 WHAMMP3Q1A5X7 153 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 RAB6CQ53S08 254 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 EFHC1Q5JVL4 640 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 OTUD1Q5VV17 481 aaPredicted RBP13.64□□□□□ -0.23
COL4A1-202ENST00000467182 CC2D1AQ6P1N0 951 aaPredicted RBP13.64□□□□□ -0.23
COL4A1-202ENST00000467182 BNIPLQ7Z465 357 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 SPRED2Q7Z698 418 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 VPS52Q8N1B4 723 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 RASGEF1CQ8N431 466 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 KLHL23Q8NBE8 558 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 SPPL2BQ8TCT7 592 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 C2orf15Q8WU43 125 aaKnown RBP13.64□□□□□ -0.23
COL4A1-202ENST00000467182 PBKQ96KB5 322 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 SLC2A13Q96QE2 648 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 DDX23Q9BUQ8 820 aaKnown RBP13.64□□□□□ -0.23
COL4A1-202ENST00000467182 RAB6CQ9H0N0 254 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 CNGB3Q9NQW8 809 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 EHD2Q9NZN4 543 aa13.64□□□□□ -0.23
COL4A1-202ENST00000467182 CCDC66A2RUB6 948 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 YJEFN3A6XGL0 299 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 GRXCR1A8MXD5 290 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 E7ENQ6 273 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 C2CD2LO14523 706 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 KCNK3O14649 394 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 TRIM66O15016 1216 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 HSF2BPO75031 334 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 LRCH4O75427 683 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 DAB1O75553 588 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 ZBED1O96006 694 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 GLI1P08151 1106 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 USP17L7P0C7H9 530 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 CTSAP10619 480 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 MYOGP15173 224 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 PDGFRAP16234 1089 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 TFE3P19532 575 aaPredicted RBP13.63□□□□□ -0.23
COL4A1-202ENST00000467182 GRIK1P39086 918 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 PTPN9P43378 593 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 SLC5A3P53794 718 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 SLC25A11Q02978 314 aaKnown RBP13.63□□□□□ -0.23
COL4A1-202ENST00000467182 DDR2Q16832 855 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 C15orf59Q2T9L4 293 aaPredicted RBP13.63□□□□□ -0.23
COL4A1-202ENST00000467182 SH3PXD2AQ5TCZ1 1133 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 SDHAF4Q5VUM1 108 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 TXNRD3NBQ6F5E7 133 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 KIAA1841Q6NSI8 718 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 CYP4V2Q6ZWL3 525 aaPredicted RBP13.63□□□□□ -0.23
COL4A1-202ENST00000467182 ZNF572Q7Z3I7 529 aaPredicted RBP13.63□□□□□ -0.23
COL4A1-202ENST00000467182 SCN4BQ8IWT1 228 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 SIX6OS1Q8N1H7 587 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 SCAMP5Q8TAC9 235 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.63□□□□□ -0.23
COL4A1-202ENST00000467182 AUTS2Q8WXX7 1259 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 IRGQQ8WZA9 623 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 CENPIQ92674 756 aaPredicted RBP13.63□□□□□ -0.23
COL4A1-202ENST00000467182 MS4A14Q96JA4 679 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 CFAP57Q96MR6 1250 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 CNPY3Q9BT09 278 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 CARD6Q9BX69 1037 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 RXFP1Q9HBX9 757 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 SMARCAL1Q9NZC9 954 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 IL37Q9NZH6 218 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 FNIP2Q9P278 1114 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 USTQ9Y2C2 406 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 SLC27A5Q9Y2P5 690 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 NR2E3Q9Y5X4 410 aa13.63□□□□□ -0.23
COL4A1-202ENST00000467182 FAM92AA1XBS5 289 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 C5orf67F2Z3F1 127 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 PSTPIP1O43586 416 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 SOAT2O75908 522 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 SEC24AO95486 1093 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 URODP06132 367 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 DNAJB1P25685 340 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 IL1R2P27930 398 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 USP46P62068 366 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 YWHAZP63104 245 aaKnown RBP13.62□□□□□ -0.23
COL4A1-202ENST00000467182 DUSP4Q13115 394 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 RAB33AQ14088 237 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 ACAP1Q15027 740 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 LRRC38Q5VT99 294 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 AADACL2Q6P093 401 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 RHOT1Q8IXI2 618 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 DEFB106AQ8N104 65 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 STKLD1Q8NE28 680 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 NT5C3BQ969T7 300 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 CAPZA3Q96KX2 299 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 SPATA17Q96L03 361 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 PEBP4Q96S96 227 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 GDF15Q99988 308 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 C17orf80Q9BSJ5 609 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 CARD9Q9H257 536 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 CALCOCO1Q9P1Z2 691 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 STK39Q9UEW8 545 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 AFF4Q9UHB7 1163 aaKnown RBP13.62□□□□□ -0.23
COL4A1-202ENST00000467182 LZTS1Q9Y250 596 aa13.62□□□□□ -0.23
COL4A1-202ENST00000467182 ZNF638Q14966 1978 aaKnown RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms