RNA–Protein interactions for RNA: ENST00000465966.4

DDR1-242, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 1 (best)

Gene DDR1, Length 268 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-242ENST00000465966 MAGEC2Q9UBF1 373 aaPredicted RBP9.17□□□□□ -0.94
DDR1-242ENST00000465966 MSRB2Q9Y3D2 182 aa9.17□□□□□ -0.94
DDR1-242ENST00000465966 PCDHB13Q9Y5F0 798 aa9.17□□□□□ -0.94
DDR1-242ENST00000465966 TRAV19A0A0A6YYK7 116 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 ANO9A1A5B4 782 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 LRRC10BA6NIK2 292 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 PATE3B3GLJ2 98 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 TNFRSF10BO14763 440 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 PPEF2O14830 753 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 HYAL3O43820 417 aaPredicted RBP9.16□□□□□ -0.94
DDR1-242ENST00000465966 CALUO43852 315 aaPredicted RBP9.16□□□□□ -0.94
DDR1-242ENST00000465966 NFATC1O95644 943 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 CKMP06732 381 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 TPM3P06753 285 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 ADRB2P07550 413 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 HMGA1P17096 107 aaKnown RBP9.16□□□□□ -0.94
DDR1-242ENST00000465966 ABCD1P33897 745 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 MAPK8P45983 427 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 MTIF2P46199 727 aaKnown RBP9.16□□□□□ -0.94
DDR1-242ENST00000465966 CASP4P49662 377 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 PDE6CP51160 858 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 SEC13P55735 322 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 MARSP56192 900 aaKnown RBP9.16□□□□□ -0.94
DDR1-242ENST00000465966 SIM1P81133 766 aaPredicted RBP9.16□□□□□ -0.94
DDR1-242ENST00000465966 ARID5BQ14865 1188 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 CCDC40Q4G0X9 1142 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 C2orf27AQ580R0 203 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 WSCD1Q658N2 575 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 CCDC186Q7Z3E2 898 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 FILIP1Q7Z7B0 1213 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 LRRTM3Q86VH5 581 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 RASSF3Q86WH2 238 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 SYT12Q8IV01 421 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 HDDC3Q8N4P3 179 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 USP33Q8TEY7 942 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 ACCSQ96QU6 501 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 TUBGCP2Q9BSJ2 902 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 HAPLN2Q9GZV7 340 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 ASB7Q9H672 318 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 TMEM206Q9H813 350 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 CPSF3Q9UKF6 684 aaKnown RBP9.16□□□□□ -0.94
DDR1-242ENST00000465966 C2CD2Q9Y426 696 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 ATRXP46100 2492 aa9.16□□□□□ -0.94
DDR1-242ENST00000465966 ITIH6Q6UXX5 1313 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 A0A0B4J269 797 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 GOLGA6L6A8MZA4 724 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 KPNA7A9QM74 516 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 CETN3O15182 167 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 SLC16A3O15427 465 aaKnown RBP9.15□□□□□ -0.94
DDR1-242ENST00000465966 FGFR1OPO95684 399 aaKnown RBP9.15□□□□□ -0.94
DDR1-242ENST00000465966 NFICP08651 508 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 PRKCSHP14314 528 aaPredicted RBP9.15□□□□□ -0.94
DDR1-242ENST00000465966 ENGP17813 658 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 BCKDHBP21953 392 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 CYP2J2P51589 502 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 MRPS21P82921 87 aaKnown RBP9.15□□□□□ -0.94
DDR1-242ENST00000465966 TBX2Q13207 712 aaPredicted RBP9.15□□□□□ -0.94
DDR1-242ENST00000465966 ADAM9Q13443 819 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 HNRNPDQ14103 355 aaKnown RBP9.15□□□□□ -0.94
DDR1-242ENST00000465966 ZNF77Q15935 545 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 CRY1Q16526 586 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 MAN2A1Q16706 1144 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 EML3Q32P44 896 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 SV2CQ496J9 727 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 FILIP1LQ4L180 1135 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 HS1BP3Q53T59 392 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 SPDYCQ5MJ68 293 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 CEP135Q66GS9 1140 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 NAIF1Q69YI7 327 aaPredicted RBP9.15□□□□□ -0.94
DDR1-242ENST00000465966 SLC39A4Q6P5W5 647 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 HS2ST1Q7LGA3 356 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 CREBRFQ8IUR6 639 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 TRIM59Q8IWR1 403 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 C12orf56Q8IXR9 622 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 EFCAB13Q8IY85 973 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 SYCP3Q8IZU3 236 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 MDGA1Q8NFP4 955 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 WHAMMQ8TF30 809 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 EZH1Q92800 747 aaPredicted RBP9.15□□□□□ -0.94
DDR1-242ENST00000465966 KCNN1Q92952 543 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 TRIM44Q96DX7 344 aaPredicted RBP9.15□□□□□ -0.94
DDR1-242ENST00000465966 TRMT2BQ96GJ1 504 aaKnown RBP9.15□□□□□ -0.94
DDR1-242ENST00000465966 ZNF560Q96MR9 790 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 PI4K2AQ9BTU6 479 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 ABCB6Q9NP58 842 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 POLMQ9NP87 494 aaPredicted RBP9.15□□□□□ -0.94
DDR1-242ENST00000465966 DMAC2Q9NW81 257 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 DPP3Q9NY33 737 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 BCCIPQ9P287 314 aaKnown RBP eCLIP9.15□□□□□ -0.94
DDR1-242ENST00000465966 IMPACTQ9P2X3 320 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 MMP17Q9ULZ9 603 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 WNT6Q9Y6F9 365 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.15□□□□□ -0.94
DDR1-242ENST00000465966 FAM208BQ5VWN6 2430 aa9.15□□□□□ -0.94
DDR1-242ENST00000465966 BAHCC1Q9P281 2608 aa9.14□□□□□ -0.95
DDR1-242ENST00000465966 SPAARA0A1B0GVQ0 90 aa9.14□□□□□ -0.95
DDR1-242ENST00000465966 UPK3BL1B0FP48 263 aa9.14□□□□□ -0.95
DDR1-242ENST00000465966 ANKRD63C9JTQ0 380 aa9.14□□□□□ -0.95
DDR1-242ENST00000465966 UPK3BL2E5RIL1 263 aa9.14□□□□□ -0.95
DDR1-242ENST00000465966 TULP1O00294 542 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms