RNA–Protein interactions for RNA: ENST00000465245.1

TRA2B-208, Transcript of transformer 2 beta homolog, human

TSL 3

Gene TRA2B, Length 634 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRA2B-208	ENST00000465245	MTMR12	Q9C0I1	747 aa		12.84	□□□□□ -0.35
TRA2B-208	ENST00000465245	CCDC86	Q9H6F5	360 aa	Known RBP	12.84	□□□□□ -0.35
TRA2B-208	ENST00000465245	DNAAF2	Q9NVR5	837 aa	Known RBP	12.84	□□□□□ -0.35
TRA2B-208	ENST00000465245	CDH9	Q9ULB4	789 aa		12.84	□□□□□ -0.35
TRA2B-208	ENST00000465245	EXOC7	Q9UPT5	735 aa		12.84	□□□□□ -0.35
TRA2B-208	ENST00000465245	R3HCC1	Q9Y3T6	440 aa	Known RBP	12.84	□□□□□ -0.35
TRA2B-208	ENST00000465245	KIF3A	Q9Y496	699 aa		12.84	□□□□□ -0.35
TRA2B-208	ENST00000465245	APC2	O95996	2303 aa		12.84	□□□□□ -0.35
TRA2B-208	ENST00000465245	TBC1D3B	A6NDS4	549 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	SH3BP5	O60239	455 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	PPP1R37	O75864	691 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	LDHA	P00338	332 aa	Known RBP	12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	FTH1P19	P0C7X4	201 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	MBL2	P11226	248 aa	Predicted RBP	12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	GABRG2	P18507	467 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	GAD2	Q05329	585 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	KCNA1	Q09470	495 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	IFRD2	Q12894	506 aa	Predicted RBP	12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	MYO1E	Q12965	1108 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	SLC14A1	Q13336	389 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	DPH6	Q7L8W6	267 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	DYM	Q7RTS9	669 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	SLC41A1	Q8IVJ1	513 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	NAXD	Q8IW45	347 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	PHTF2	Q8N3S3	785 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	PNPLA1	Q8N8W4	532 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	SPRYD3	Q8NCJ5	442 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	ADAMTS14	Q8WXS8	1223 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	HSPA12B	Q96MM6	686 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	SLITRK1	Q96PX8	696 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	MRPL44	Q9H9J2	332 aa	Known RBP	12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	CRTAC1	Q9NQ79	661 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	TBC1D14	Q9P2M4	693 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	SIX4	Q9UIU6	781 aa		12.83	□□□□□ -0.36
TRA2B-208	ENST00000465245	MYH10	P35580	1976 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	IGHV1OR15-9	A0A0B4J2B8	117 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245		A0A1W2PQD8	194 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	GOLGA8IP	A6NC78	632 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	GOLGA8J	A6NMD2	632 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245		F8VP50	259 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	PDGFRB	P09619	1106 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	LMO2	P25791	158 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	WAS	P42768	502 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	NOP14	P78316	857 aa	Known RBP	12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	TAF10	Q12962	218 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	PLEKHG6	Q3KR16	790 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	PREPL	Q4J6C6	727 aa	Predicted RBP	12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	MDH1B	Q5I0G3	518 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	C10orf76	Q5T2E6	689 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	L1TD1	Q5T7N2	865 aa	Known RBP	12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	TDRD10	Q5VZ19	366 aa	Known RBP	12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	BTBD8	Q5XKL5	378 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	NUDT18	Q6ZVK8	323 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	ETFBKMT	Q8IXQ9	262 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	RGL4	Q8IZJ4	473 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	NAT16	Q8N8M0	369 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	TRIML1	Q8N9V2	468 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	KCNV2	Q8TDN2	545 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	PCED1B	Q96HM7	432 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	ANKRD36BP1	Q96IX9	119 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	ACCS	Q96QU6	501 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	PDE11A	Q9HCR9	933 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	CYP8B1	Q9UNU6	501 aa		12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	HELZ2	Q9BYK8	2649 aa	Known RBP	12.82	□□□□□ -0.36
TRA2B-208	ENST00000465245	E2F8	A0AVK6	867 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245		H3BQV1	296 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	ZBTB24	O43167	697 aa	Predicted RBP	12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	ZNF217	O75362	1048 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	TULP3	O75386	442 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	GJB3	O75712	270 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	GCNT3	O95395	438 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	NDUFV2	P19404	249 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	GART	P22102	1010 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	NTSR1	P30989	418 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	LONP1	P36776	959 aa	Known RBP	12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	GRIN1	Q05586	938 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	CCNI2	Q6ZMN8	369 aa	Predicted RBP	12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	HS2ST1	Q7LGA3	356 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	SYCP3	Q8IZU3	236 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	TERB1	Q8NA31	727 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	MYCBPAP	Q8TBZ2	947 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	MDM1	Q8TC05	714 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	HNRNPLL	Q8WVV9	542 aa	Known RBP	12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	OTUB2	Q96DC9	234 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	HPDL	Q96IR7	371 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	MMS19	Q96T76	1030 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	STRA6	Q9BX79	667 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	FAM124B	Q9H5Z6	455 aa	Predicted RBP	12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	TBC1D7	Q9P0N9	293 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	DEC1	Q9P2X7	70 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	SEL1L	Q9UBV2	794 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	SUSD2	Q9UGT4	822 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	APOBEC2	Q9Y235	224 aa	Known RBP	12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	SH3BP1	Q9Y3L3	701 aa		12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	ASH1L	Q9NR48	2969 aa	Known RBP	12.81	□□□□□ -0.36
TRA2B-208	ENST00000465245	KALRN	O60229	2985 aa		12.8	□□□□□ -0.36
TRA2B-208	ENST00000465245		A0A1W2PQF6	199 aa		12.8	□□□□□ -0.36
TRA2B-208	ENST00000465245	EIF4E1B	A6NMX2	242 aa	Known RBP	12.8	□□□□□ -0.36
TRA2B-208	ENST00000465245	HOXC11	O43248	304 aa	Predicted RBP	12.8	□□□□□ -0.36
TRA2B-208	ENST00000465245	NDUFS2	O75306	463 aa		12.8	□□□□□ -0.36

Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms