RNA–Protein interactions for RNA: ENST00000464987.5

TSPAN4-210, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 2,205 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-210ENST00000464987 STAU1O95793 577 aaKnown RBP19.52■□□□□ 0.72
TSPAN4-210ENST00000464987 DNAJC3Q13217 504 aa19.52■□□□□ 0.72
TSPAN4-210ENST00000464987 PKDCCQ504Y2 493 aa19.52■□□□□ 0.72
TSPAN4-210ENST00000464987 DPY19L2Q6NUT2 758 aa19.52■□□□□ 0.72
TSPAN4-210ENST00000464987 L3MBTL3Q96JM7 780 aaPredicted RBP19.52■□□□□ 0.72
TSPAN4-210ENST00000464987 SMC6Q96SB8 1091 aa19.52■□□□□ 0.72
TSPAN4-210ENST00000464987 SLCO1B3Q9NPD5 702 aa19.52■□□□□ 0.72
TSPAN4-210ENST00000464987 PSMC3IPQ9P2W1 217 aaPredicted RBP19.52■□□□□ 0.72
TSPAN4-210ENST00000464987 CHMP2BQ9UQN3 213 aa19.52■□□□□ 0.72
TSPAN4-210ENST00000464987 PRPF4O43172 522 aaKnown RBP eCLIP19.52■□□□□ 0.711e-6■■■■□ 20.9
TSPAN4-210ENST00000464987 PRPSAP2O60256 369 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 FGFR1P11362 822 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 GCLCP48506 637 aaPredicted RBP19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 GEMIN4P57678 1058 aaKnown RBP19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 IL9RQ01113 521 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 MTFR1Q15390 333 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 SMYD5Q6GMV2 418 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 GPR142Q7Z601 462 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 DPP9Q86TI2 863 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 FITM2Q8N6M3 262 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 OR6J1Q8NGC5 347 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 CLEC4CQ8WTT0 213 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 MAML3Q96JK9 1138 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 RNF157Q96PX1 679 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 OSMRQ99650 979 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 MIS12Q9H081 205 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 ADAMTS10Q9H324 1103 aa19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 C12orf65Q9H3J6 166 aaKnown RBP19.52■□□□□ 0.71
TSPAN4-210ENST00000464987 TYROBPO43914 113 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 AVILO75366 819 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 KRT4P19013 534 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 CA4P22748 312 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 ATXN1P54253 815 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 ROR1Q01973 937 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 NR1H3Q13133 447 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 KYAT1Q16773 422 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 AGGF1Q8N302 714 aaeCLIP19.51■□□□□ 0.711e-7■■■■□ 23.7
TSPAN4-210ENST00000464987 ANKLE1Q8NAG6 615 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 ATP11CQ8NB49 1132 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 FAM172AQ8WUF8 416 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 BRI3BPQ8WY22 251 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 PAFAH2Q99487 392 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 PITPNM3Q9BZ71 974 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 SLC24A2Q9UI40 661 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 CCL15-CCL14A0A0B4J2E2 113 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 PAPSS1O43252 624 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 CCL15Q16663 113 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 DUSP28Q4G0W2 176 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 PQLC3Q8N755 202 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 PLD5Q8N7P1 536 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 SNX27Q96L92 541 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 KLF6Q99612 283 aaPredicted RBP19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 APOL6Q9BWW8 343 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 NXF3Q9H4D5 531 aaKnown RBP19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 CD248Q9HCU0 757 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 ARL2BPQ9Y2Y0 163 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 HEY1Q9Y5J3 304 aa19.51■□□□□ 0.71
TSPAN4-210ENST00000464987 H7C0C1 242 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 GOLGA8RI6L899 631 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 AKAP5P24588 427 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 ELK3P41970 407 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 ATP5OP48047 213 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 KRT81Q14533 505 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 GALNTL6Q49A17 601 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 FAXCQ5TGI0 409 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 ZNF410Q86VK4 478 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 PALM2Q8IXS6 379 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 NPLOC4Q8TAT6 608 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 SLC35F5Q8WV83 523 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 SNRNP25Q9BV90 132 aaKnown RBP19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 ACSS3Q9H6R3 686 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 USP29Q9HBJ7 922 aa19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 MYO18AQ92614 2054 aaKnown RBP19.5■□□□□ 0.71
TSPAN4-210ENST00000464987 GPR32O75388 356 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 GSTA1P08263 222 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 MNAT1P51948 309 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 HIC1Q14526 733 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 PRAMEF19Q5SWL8 479 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 ICE2Q659A1 982 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 ADGRD1Q6QNK2 874 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 CATSPER4Q7RTX7 472 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 FAM228AQ86W67 206 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 NT5DC4Q86YG4 428 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 PDIK1LQ8N165 341 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 C7orf31Q8N865 590 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 OR6B3Q8NGW1 331 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 PCDH19Q8TAB3 1148 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 TRAF3IP1Q8TDR0 691 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 MZB1Q8WU39 189 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 LENG1Q96BZ8 264 aaPredicted RBP19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 SLC4A5Q9BY07 1137 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 PCDH18Q9HCL0 1135 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 KIAA1257Q9ULG3 409 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 NDC80O14777 642 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 RBL1P28749 1068 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 YARSP54577 528 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 NCALDP61601 193 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 SLC6A3Q01959 620 aa19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 RNASELQ05823 741 aaKnown RBP19.49■□□□□ 0.71
TSPAN4-210ENST00000464987 ACVR2BQ13705 512 aa19.49■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms