RNA–Protein interactions for RNA: ENST00000464547.5

ATF3-207, Transcript of activating transcription factor 3, humanhuman

TSL 1 (best)

Gene ATF3, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-207ENST00000464547 STAU2Q9NUL3 570 aaKnown RBP eCLIP10.29□□□□□ -0.76
ATF3-207ENST00000464547 DNAJC17Q9NVM6 304 aaKnown RBP10.29□□□□□ -0.76
ATF3-207ENST00000464547 GPATCH2LQ9NWQ4 482 aa10.29□□□□□ -0.76
ATF3-207ENST00000464547 NINJ2Q9NZG7 142 aa10.29□□□□□ -0.76
ATF3-207ENST00000464547 SAE1Q9UBE0 346 aaPredicted RBP10.29□□□□□ -0.76
ATF3-207ENST00000464547 TPX2Q9ULW0 747 aaKnown RBP10.29□□□□□ -0.76
ATF3-207ENST00000464547 PADI3Q9ULW8 664 aa10.29□□□□□ -0.76
ATF3-207ENST00000464547 GIT1Q9Y2X7 761 aa10.29□□□□□ -0.76
ATF3-207ENST00000464547 ARL5CA6NH57 179 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 A6NNZ2 444 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 DCDC2CA8MYV0 355 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 SGK1O00141 431 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 CLDN5O00501 218 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 EIF3HO15372 352 aaKnown RBP eCLIP10.28□□□□□ -0.76
ATF3-207ENST00000464547 MGEA5O60502 916 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 ZNF623O75123 536 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 THP07101 528 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 GHRP10912 638 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 PECAM1P16284 738 aaPredicted RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 TFE3P19532 575 aaPredicted RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 MDH1P40925 334 aaKnown RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 PTPN9P43378 593 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 SCNN1GP51170 649 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 HDAC4P56524 1084 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 EIF3EP60228 445 aaKnown RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 MAGOHP61326 146 aaKnown RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 PLCB3Q01970 1234 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 PTK7Q13308 1070 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 TFDP2Q14188 446 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 KRT81Q14533 505 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 LPIN1Q14693 890 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 PDK2Q15119 407 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 CA9Q16790 459 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 SKIDA1Q1XH10 827 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 TUBB8Q3ZCM7 444 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 ZC3H12AQ5D1E8 599 aaKnown RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 C6orf118Q5T5N4 469 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 SCYL2Q6P3W7 929 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 ARCQ7LC44 396 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 PIGZQ86VD9 579 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 RELL1Q8IUW5 271 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 ZCCHC9Q8N567 271 aaKnown RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 ARFGAP2Q8N6H7 521 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 PCSK9Q8NBP7 692 aaKnown RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 CENPIQ92674 756 aaPredicted RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 PGM2Q96G03 612 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 RNF157Q96PX1 679 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 TBCBQ99426 244 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 TMEM121Q9BTD3 319 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 C11orf84Q9BUA3 381 aaPredicted RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 SNRNP25Q9BV90 132 aaKnown RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 CALN1Q9BXU9 219 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 MAK16Q9BXY0 300 aaKnown RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 GPBP1L1Q9HC44 474 aaPredicted RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 PCDH18Q9HCL0 1135 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 CRTAC1Q9NQ79 661 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 SRRDQ9UH36 339 aa10.28□□□□□ -0.76
ATF3-207ENST00000464547 DDX20Q9UHI6 824 aaKnown RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 GTF3C5Q9Y5Q8 519 aaPredicted RBP10.28□□□□□ -0.76
ATF3-207ENST00000464547 TLDC2A0PJX2 215 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 SMIM23A6NLE4 172 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 APOC4-APOC2K7ER74 178 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 ACSL3O95573 720 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 TTC4O95801 387 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 APOC2P02655 101 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 IL4RP24394 825 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 HPDP32754 393 aaPredicted RBP10.27□□□□□ -0.77
ATF3-207ENST00000464547 RPL9P32969 192 aaKnown RBP10.27□□□□□ -0.77
ATF3-207ENST00000464547 RPL22P35268 128 aaKnown RBP10.27□□□□□ -0.77
ATF3-207ENST00000464547 RAB27AP51159 221 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 CLCNKBP51801 687 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 GDF10P55107 478 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 PPP2R2AP63151 447 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 GUCY1A3Q02108 690 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 ADCY1Q08828 1119 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 ITGA7Q13683 1181 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 MORF4L2Q15014 288 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 NOMO1Q15155 1222 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 ZSCAN26Q16670 478 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 KYNUQ16719 465 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 MDH1BQ5I0G3 518 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 RNASEH2BQ5TBB1 312 aaKnown RBP10.27□□□□□ -0.77
ATF3-207ENST00000464547 MAP3K21Q5TCX8 1036 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 NPNTQ6UXI9 565 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 DSTYKQ6XUX3 929 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 CEP128Q6ZU80 1094 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 UNC45BQ8IWX7 931 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 REM2Q8IYK8 340 aaPredicted RBP10.27□□□□□ -0.77
ATF3-207ENST00000464547 PQLC3Q8N755 202 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 C3orf58Q8NDZ4 430 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 CD99L2Q8TCZ2 262 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 EPS8L3Q8TE67 593 aaKnown RBP10.27□□□□□ -0.77
ATF3-207ENST00000464547 RSAD2Q8WXG1 361 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 KCTD13Q8WZ19 329 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 NDRG1Q92597 394 aaKnown RBP10.27□□□□□ -0.77
ATF3-207ENST00000464547 CAPNS2Q96L46 248 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 MED10Q9BTT4 135 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 ADAM33Q9BZ11 813 aa10.27□□□□□ -0.77
ATF3-207ENST00000464547 ROPN1BQ9BZX4 212 aaPredicted RBP10.27□□□□□ -0.77
ATF3-207ENST00000464547 ROPN1Q9HAT0 212 aaPredicted RBP10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms