RNA–Protein interactions for RNA: ENST00000464313.1

PTPN12-210, Transcript of protein tyrosine phosphatase, non-receptor type 12, human

TSL 4

Gene PTPN12, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTPN12-210	ENST00000464313	CDK4	P11802	303 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	YY1	P25490	414 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	ATIC	P31939	592 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	MPL	P40238	635 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	CHAF1A	Q13111	956 aa	Predicted RBP	4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	MPP3	Q13368	585 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	TREML2	Q5T2D2	321 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	CERCAM	Q5T4B2	595 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	MANEAL	Q5VSG8	457 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	DPY19L3	Q6ZPD9	716 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	KRT28	Q7Z3Y7	464 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	PEG10	Q86TG7	708 aa	Known RBP	4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	SYTL1	Q8IYJ3	562 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	IZUMO1	Q8IYV9	350 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	SUPT20H	Q8NEM7	779 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	ATRIP	Q8WXE1	791 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	R3HDM4	Q96D70	268 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	GDF15	Q99988	308 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	C17orf80	Q9BSJ5	609 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	MAGEB5	Q9BZ81	275 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	TRIM5	Q9C035	493 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	WDR12	Q9GZL7	423 aa	Known RBP	4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	GLOD4	Q9HC38	313 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	KLC4	Q9NSK0	619 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	CAPN11	Q9UMQ6	739 aa		4.86	□□□□□ -1.63
PTPN12-210	ENST00000464313	ARHGEF17	Q96PE2	2063 aa	Predicted RBP	4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313		A1L4Q6	167 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	PODXL	O00592	558 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	SLC16A3	O15427	465 aa	Known RBP	4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	MPPED1	O15442	326 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	NR2F6	P10588	404 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	PCSK6	P29122	969 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	UQCRC1	P31930	480 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	AVPR1B	P47901	424 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	COPA	P53621	1224 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	BLOC1S1	P78537	153 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	BTK	Q06187	659 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	CCNI	Q14094	377 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	STARD3	Q14849	445 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	PTPRR	Q15256	657 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	RAP1GAP2	Q684P5	730 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	KIAA0895L	Q68EN5	471 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	GGT6	Q6P531	493 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	FBXO38	Q6PIJ6	1188 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	KIAA0408	Q6ZU52	694 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	DTX2	Q86UW9	622 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	CCDC150	Q8NCX0	1101 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	ACTRT2	Q8TDY3	377 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	IPO4	Q8TEX9	1081 aa	Known RBP	4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	RFK	Q969G6	155 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	PBK	Q96KB5	322 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	COQ10A	Q96MF6	247 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	STK33	Q9BYT3	514 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	DDX24	Q9GZR7	859 aa	Known RBP eCLIP	4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	TRMT13	Q9NUP7	481 aa	Known RBP	4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	RGL1	Q9NZL6	768 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	EHD3	Q9NZN3	535 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313	SLC39A10	Q9ULF5	831 aa		4.85	□□□□□ -1.63
PTPN12-210	ENST00000464313		A0A087WV62	115 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	MGST3	O14880	152 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	TLR5	O60602	858 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	PLA2G6	O60733	806 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	ESRRB	O95718	433 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	ONECUT2	O95948	504 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	ELFN1	P0C7U0	828 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	PECAM1	P16284	738 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	ZFX	P17010	805 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	TEC	P42680	631 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	TRAPPC10	P48553	1259 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	PGD	P52209	483 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	BCAT1	P54687	386 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	MRPS35	P82673	323 aa	Known RBP	4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	TNFAIP2	Q03169	654 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	TAP1	Q03518	808 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	TRIM14	Q14142	442 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	ARHGAP15	Q53QZ3	475 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	ZNF618	Q5T7W0	954 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	KAZN	Q674X7	775 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	CAND1	Q86VP6	1230 aa	Known RBP	4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	CCDC28A	Q8IWP9	274 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	C11orf44	Q8N8P7	122 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	XAGE5	Q8WWM1	108 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	MUL1	Q969V5	352 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	ALG8	Q9BVK2	526 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	SELENOO	Q9BVL4	669 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	TTLL2	Q9BWV7	592 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	PCDHAC1	Q9H158	963 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	SLC25A32	Q9H2D1	315 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	FAM83D	Q9H4H8	585 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	PTPRH	Q9HD43	1115 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	LRIT1	Q9P2V4	623 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	VPS51	Q9UID3	782 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	ZMYND8	Q9ULU4	1186 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	MAGED2	Q9UNF1	606 aa	Predicted RBP	4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	LRCH1	Q9Y2L9	728 aa		4.84	□□□□□ -1.63
PTPN12-210	ENST00000464313	LINC00473	A8K010	186 aa		4.83	□□□□□ -1.64
PTPN12-210	ENST00000464313	ADAMTS3	O15072	1205 aa		4.83	□□□□□ -1.64
PTPN12-210	ENST00000464313	KCNQ3	O43525	872 aa		4.83	□□□□□ -1.64
PTPN12-210	ENST00000464313	IL6R	P08887	468 aa	Predicted RBP	4.83	□□□□□ -1.64
PTPN12-210	ENST00000464313	AR	P10275	920 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms