RNA–Protein interactions for RNA: ENST00000463988.1

SNRNP40-203, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 2

Gene SNRNP40, Length 677 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-203ENST00000463988 E2F8A0AVK6 867 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 AP1G2O75843 785 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 APBB3O95704 486 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 CYP17A1P05093 508 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 ZDHHC11BP0C7U3 371 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 MBL2P11226 248 aaPredicted RBP15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 RPL13P26373 211 aaKnown RBP15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 EIF2DP41214 584 aaKnown RBP15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 ASPAP45381 313 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 PXNP49023 591 aaPredicted RBP15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 VAMP7P51809 220 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 SLC5A3P53794 718 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 MCCD1P59942 119 aaPredicted RBP15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 DHCR24Q15392 516 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 GAB4Q2WGN9 574 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 HECTD3Q5T447 861 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 KRBA2Q6ZNG9 492 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 PRR23CQ6ZRP0 262 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 ACOT1Q86TX2 421 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 SCAMP5Q8TAC9 235 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 NETO1Q8TDF5 533 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 OTUB2Q96DC9 234 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 ZC3H10Q96K80 434 aaKnown RBP15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 CSNK1G1Q9HCP0 422 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 SMPD4Q9NXE4 827 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 CFAP97Q9P2B7 532 aa15.23■□□□□ 0.03
SNRNP40-203ENST00000463988 MED19A0JLT2 244 aaPredicted RBP15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 AXIN1O15169 862 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 COCHO43405 550 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 ADH1CP00326 375 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 HLA-DRAP01903 254 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 PRR29P0C7W0 189 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 CCDC192P0DO97 292 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 TRIM21P19474 475 aaKnown RBP15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 NR2F2P24468 414 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 PIK3CAP42336 1068 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 NDST1P52848 882 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 INCA1Q0VD86 236 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 DMC1Q14565 340 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 RHBDF2Q6PJF5 856 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 SLC2A14Q8TDB8 520 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 USP33Q8TEY7 942 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 CCDC34Q96HJ3 373 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 CHAMP1Q96JM3 812 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 ZFRQ96KR1 1074 aaKnown RBP15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 IMPG2Q9BZV3 1241 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 FBXO44Q9H4M3 255 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 CYP3A43Q9HB55 503 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 KRT82Q9NSB4 513 aa15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 CHORDC1Q9UHD1 332 aaPredicted RBP15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 DYNC1LI1Q9Y6G9 523 aaKnown RBP15.22■□□□□ 0.03
SNRNP40-203ENST00000463988 RALGAPA1Q6GYQ0 2036 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 A0A0A0MRY4 1105 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 K7EQS6 105 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 SLC30A4O14863 429 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 EPN2O95208 641 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 KRT13P13646 458 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 PSMC2P35998 433 aaKnown RBP15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 IFRD2Q12894 506 aaPredicted RBP15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 ADAM9Q13443 819 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 KBTBD6Q86V97 674 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 ZMIZ2Q8NF64 920 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 ELMO3Q96BJ8 720 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 FAXDC2Q96IV6 333 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 HHIPQ96QV1 700 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 HNRNPABQ99729 332 aaKnown RBP15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 SMOQ99835 787 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 POLR3BQ9NW08 1133 aaPredicted RBP15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 PCDHGA5Q9Y5G8 931 aa15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 CNOT1A5YKK6 2376 aaKnown RBP15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 TPRP12270 2363 aaKnown RBP15.21■□□□□ 0.03
SNRNP40-203ENST00000463988 ZNF202O95125 648 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 CCDC130P13994 396 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 GTF2H1P32780 548 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 MRPS21P82921 87 aaKnown RBP15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 EDRF1Q3B7T1 1238 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 HSF5Q4G112 596 aaPredicted RBP15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 ZCWPW2Q504Y3 356 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 SPOPLQ6IQ16 392 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 FAM186BQ8IYM0 893 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 PNKPQ96T60 521 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 NT5C1AQ9BXI3 368 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 DNAI2Q9GZS0 605 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 GOLPH3LQ9H4A5 285 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 CCSER2Q9H7U1 834 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 PNPLA8Q9NP80 782 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 GMIPQ9P107 970 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 HMGXB4Q9UGU5 601 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 MMP17Q9ULZ9 603 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 KIAA1549LQ6ZVL6 1849 aa15.2■□□□□ 0.02
SNRNP40-203ENST00000463988 MYO16Q9Y6X6 1858 aa15.19■□□□□ 0.02
SNRNP40-203ENST00000463988 LOC105378220A0A1B0GUY1 285 aaPredicted RBP15.19■□□□□ 0.02
SNRNP40-203ENST00000463988 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.19■□□□□ 0.02
SNRNP40-203ENST00000463988 BEST1O76090 585 aa15.19■□□□□ 0.02
SNRNP40-203ENST00000463988 ZNF806P0C7X5 589 aa15.19■□□□□ 0.02
SNRNP40-203ENST00000463988 FAM200BP0CF97 657 aa15.19■□□□□ 0.02
SNRNP40-203ENST00000463988 ADH5P11766 374 aa15.19■□□□□ 0.02
SNRNP40-203ENST00000463988 GRIA2P42262 883 aa15.19■□□□□ 0.02
SNRNP40-203ENST00000463988 GCLMP48507 274 aa15.19■□□□□ 0.02
SNRNP40-203ENST00000463988 DGKEP52429 567 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms