RNA–Protein interactions for RNA: ENST00000463200.5

LINC00879-202, long intergenic non-protein coding RNA 879, humanhuman

TSL 1 (best) BASIC

Gene LINC00879, Length 1,041 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00879-202ENST00000463200 CD44P16070 742 aaKnown RBP12.87□□□□□ -0.35
LINC00879-202ENST00000463200 ACO1P21399 889 aaKnown RBP12.87□□□□□ -0.35
LINC00879-202ENST00000463200 SOX9P48436 509 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 PSEN1P49768 467 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 TUBP50607 506 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 CACNA2D1P54289 1103 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 SLC7A9P82251 487 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 LRMPQ12912 555 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 USP4Q13107 963 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 CUL2Q13617 745 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 ZNF77Q15935 545 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 TTI2Q6NXR4 508 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 PAQR9Q6ZVX9 377 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 FAM114A1Q8IWE2 563 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 PPM1KQ8N3J5 372 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 MLKLQ8NB16 471 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 SCAMP5Q8TAC9 235 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 SEMA4DQ92854 862 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 LRRC3BQ96PB8 259 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 CDK5RAP1Q96SZ6 601 aaKnown RBP12.87□□□□□ -0.35
LINC00879-202ENST00000463200 FAM83CQ9BQN1 747 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 DUSP16Q9BY84 665 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 FAM126AQ9BYI3 521 aaPredicted RBP12.87□□□□□ -0.35
LINC00879-202ENST00000463200 NUP62CLQ9H1M0 184 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 CHRDQ9H2X0 955 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 TBC1D14Q9P2M4 693 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 CHORDC1Q9UHD1 332 aaPredicted RBP12.87□□□□□ -0.35
LINC00879-202ENST00000463200 KIAA1257Q9ULG3 409 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 COQ4Q9Y3A0 265 aa12.87□□□□□ -0.35
LINC00879-202ENST00000463200 TNFRSF10BO14763 440 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 PMM2O15305 246 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 OAS1P00973 400 aaKnown RBP12.86□□□□□ -0.35
LINC00879-202ENST00000463200 RALAP11233 206 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 DRD1P21728 446 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 CXCL12P48061 93 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 PREPLQ4J6C6 727 aaPredicted RBP12.86□□□□□ -0.35
LINC00879-202ENST00000463200 SGO2Q562F6 1265 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 PPP1R26Q5T8A7 1209 aaPredicted RBP12.86□□□□□ -0.35
LINC00879-202ENST00000463200 TRIM68Q6AZZ1 485 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 CLEC20AQ6ZU45 233 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 ARHGAP18Q8N392 663 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 SECISBP2LQ93073 1101 aaKnown RBP12.86□□□□□ -0.35
LINC00879-202ENST00000463200 TATDN2Q93075 761 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 FAM81BQ96LP2 452 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 TWNKQ96RR1 684 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 SLC22A12Q96S37 553 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 SMOQ99835 787 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 CLSTN2Q9H4D0 955 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 ECT2Q9H8V3 914 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 SMPD4Q9NXE4 827 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 GMIPQ9P107 970 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 LSM7Q9UK45 103 aaKnown RBP12.86□□□□□ -0.35
LINC00879-202ENST00000463200 WNT6Q9Y6F9 365 aa12.86□□□□□ -0.35
LINC00879-202ENST00000463200 E2F8A0AVK6 867 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 PROB1E7EW31 1015 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 TLR5O60602 858 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 ADH1CP00326 375 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 CHRNB1P11230 501 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 VDRP11473 427 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 ATP5C1P36542 298 aaKnown RBP12.85□□□□□ -0.35
LINC00879-202ENST00000463200 KCNH2Q12809 1159 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 MTAPQ13126 283 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 FBXO43Q4G163 708 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 SNX30Q5VWJ9 437 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 BTBD8Q5XKL5 378 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 NUDT18Q6ZVK8 323 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 SPEM1Q8N4L4 309 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 OTUB2Q96DC9 234 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 DUSP9Q99956 384 aaKnown RBP12.85□□□□□ -0.35
LINC00879-202ENST00000463200 P2RY13Q9BPV8 354 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 HINFPQ9BQA5 517 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 UBXN6Q9BZV1 441 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 HPS4Q9NQG7 708 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 CFAP97Q9P2B7 532 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 SCML2Q9UQR0 700 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 PCDHB4Q9Y5E5 795 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 PCDHGA2Q9Y5H1 932 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 COL4A3Q01955 1670 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 WDFY4Q6ZS81 3184 aa12.85□□□□□ -0.35
LINC00879-202ENST00000463200 COCHO43405 550 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 BEST1O76090 585 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 OLFM2O95897 454 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 LMNAP02545 664 aaKnown RBP12.84□□□□□ -0.35
LINC00879-202ENST00000463200 ARSAP15289 507 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 BMP6P22004 513 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 GJA4P35212 333 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 MTIF2P46199 727 aaKnown RBP12.84□□□□□ -0.35
LINC00879-202ENST00000463200 VASPP50552 380 aaPredicted RBP12.84□□□□□ -0.35
LINC00879-202ENST00000463200 BCAT1P54687 386 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 RAD23BP54727 409 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 MARSP56192 900 aaKnown RBP12.84□□□□□ -0.35
LINC00879-202ENST00000463200 STILQ15468 1287 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 EML3Q32P44 896 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 ARHGAP17Q68EM7 881 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 TMEM270Q6UE05 265 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 MAMSTRQ6ZN01 415 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 RSRC2Q7L4I2 434 aaKnown RBP12.84□□□□□ -0.35
LINC00879-202ENST00000463200 ANKRD52Q8NB46 1076 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 SLC4A11Q8NBS3 891 aa12.84□□□□□ -0.35
LINC00879-202ENST00000463200 WHAMMQ8TF30 809 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms