RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 ACAP3Q96P50 834 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 TRAPPC9Q96Q05 1148 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 CALN1Q9BXU9 219 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 PGAP2Q9UHJ9 254 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 ANGPTL2Q9UKU9 493 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 PCDHGC3Q9UN70 934 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 TTLL3Q9Y4R7 772 aa19.23■□□□□ 0.67
HPS3-204ENST00000462030 FER1L6Q2WGJ9 1857 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 DCAF8L1A6NGE4 600 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 I3L4J1 428 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 NAMPTP43490 491 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 TMPRSS15P98073 1019 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 MMRN1Q13201 1228 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 ZBTB33Q86T24 672 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 SMC1BQ8NDV3 1235 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 FGD4Q96M96 766 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 USP1O94782 785 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 ATG7O95352 703 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 PSMC1P62191 440 aaKnown RBP19.22■□□□□ 0.67
HPS3-204ENST00000462030 TTC39BQ5VTQ0 682 aaPredicted RBP19.22■□□□□ 0.67
HPS3-204ENST00000462030 IZUMO2Q6UXV1 221 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 SLC26A11Q86WA9 606 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 BRSK2Q8IWQ3 736 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 ULK2Q8IYT8 1036 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 ZFAND2BQ8WV99 257 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 ATG4CQ96DT6 458 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 GMLQ99445 158 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 THTPAQ9BU02 230 aa19.22■□□□□ 0.67
HPS3-204ENST00000462030 F8W8V4 182 aa19.21■□□□□ 0.67
HPS3-204ENST00000462030 ZCCHC18P0CG32 403 aa19.21■□□□□ 0.67
HPS3-204ENST00000462030 BMPR2Q13873 1038 aa19.21■□□□□ 0.67
HPS3-204ENST00000462030 CHI3L2Q15782 390 aa19.21■□□□□ 0.67
HPS3-204ENST00000462030 DARS2Q6PI48 645 aaKnown RBP19.21■□□□□ 0.67
HPS3-204ENST00000462030 NET1Q7Z628 596 aaPredicted RBP19.21■□□□□ 0.67
HPS3-204ENST00000462030 SHKBP1Q8TBC3 707 aa19.21■□□□□ 0.67
HPS3-204ENST00000462030 E2F7Q96AV8 911 aa19.21■□□□□ 0.67
HPS3-204ENST00000462030 C7orf26Q96N11 449 aa19.21■□□□□ 0.67
HPS3-204ENST00000462030 SLC13A1Q9BZW2 595 aa19.21■□□□□ 0.67
HPS3-204ENST00000462030 CPSF2Q9P2I0 782 aaKnown RBP19.21■□□□□ 0.67
HPS3-204ENST00000462030 SLC7A8Q9UHI5 535 aa19.21■□□□□ 0.67
HPS3-204ENST00000462030 PLLPQ9Y342 182 aa19.21■□□□□ 0.67
HPS3-204ENST00000462030 UGT1A9O60656 530 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 TM7SF2O76062 418 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 CD19P15391 556 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 MIPP30301 263 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 YWHAZP63104 245 aaKnown RBP19.2■□□□□ 0.66
HPS3-204ENST00000462030 ROR1Q01973 937 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 MYLK4Q86YV6 388 aaPredicted RBP19.2■□□□□ 0.66
HPS3-204ENST00000462030 SLC25A41Q8N5S1 370 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 FAF2Q96CS3 445 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 CPXM1Q96SM3 734 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 TTC1Q99614 292 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 TRIM4Q9C037 500 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 C20orf27Q9GZN8 174 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 RPAP3Q9H6T3 665 aaPredicted RBP19.2■□□□□ 0.66
HPS3-204ENST00000462030 UGT1A7Q9HAW7 530 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 UGT1A10Q9HAW8 530 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 UGT1A8Q9HAW9 530 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 PPME1Q9Y570 386 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 MAFGO15525 162 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 LYNP07948 512 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 SUPT20HL2P0C7V6 817 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 ARL2P36404 184 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 ALDH18A1P54886 795 aaKnown RBP19.2■□□□□ 0.66
HPS3-204ENST00000462030 AQP5P55064 265 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 ORC1Q13415 861 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 SUPT20HL1Q3ZLR7 823 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 TEX44Q53QW1 395 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 FAXCQ5TGI0 409 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 XRRA1Q6P2D8 792 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 MTHFD1LQ6UB35 978 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 WDR49Q8IV35 697 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 DHX33Q9H6R0 707 aaKnown RBP19.2■□□□□ 0.66
HPS3-204ENST00000462030 DDX43Q9NXZ2 648 aaKnown RBP19.2■□□□□ 0.66
HPS3-204ENST00000462030 ETAA1Q9NY74 926 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 TAGLN3Q9UI15 199 aa19.2■□□□□ 0.66
HPS3-204ENST00000462030 ANKRD33BA6NCL7 494 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 SPECC1L-ADORA2AF8WAN1 911 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 VWA5AO00534 786 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 RAP1GAPP47736 663 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 ACTR3P61158 418 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 MTMR2Q13614 643 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 PLAC1Q9HBJ0 212 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 SMYD2Q9NRG4 433 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 PPM1HQ9ULR3 514 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 MEI4A8MW99 385 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 PRR5-ARHGAP8B1AHC4 643 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 FAM189A1O60320 539 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 RFPL1O75677 317 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 CIB2O75838 187 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 BAG2O95816 211 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 ERBB2P04626 1255 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 SNRPAP09012 282 aaKnown RBP19.19■□□□□ 0.66
HPS3-204ENST00000462030 ASPAP45381 313 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 ARHGAP8P85298 464 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 GSTA3Q16772 222 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 TRMT5Q32P41 509 aaKnown RBP19.19■□□□□ 0.66
HPS3-204ENST00000462030 FAM83AQ86UY5 434 aa19.19■□□□□ 0.66
HPS3-204ENST00000462030 CMASQ8NFW8 434 aaPredicted RBP19.19■□□□□ 0.66
HPS3-204ENST00000462030 FNIP1Q8TF40 1166 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms