RNA–Protein interactions for RNA: ENST00000461326.1

CLK1-206, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 435 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-206ENST00000461326 TMEM108Q6UXF1 575 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 RINLQ6ZS11 566 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 KIAA0408Q6ZU52 694 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 ADGRG5Q8IZF4 528 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 TMEM132CQ8N3T6 1108 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 LCORLQ8N3X6 602 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 Q8NA96 180 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 BPIFB1Q8TDL5 484 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 PNISRQ8TF01 805 aaKnown RBP4.46□□□□□ -1.7
CLK1-206ENST00000461326 GCC1Q96CN9 775 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 ZDHHC12Q96GR4 267 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 FAM227BQ96M60 508 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 NAP1L4Q99733 375 aaKnown RBP4.46□□□□□ -1.7
CLK1-206ENST00000461326 ZSWIM1Q9BR11 485 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 LDHAL6BQ9BYZ2 381 aaPredicted RBP4.46□□□□□ -1.7
CLK1-206ENST00000461326 TRIM5Q9C035 493 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 UBA5Q9GZZ9 404 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 MAGEH1Q9H213 219 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 HELLSQ9NRZ9 838 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 INTS13Q9NVM9 706 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 MRPS18AQ9NVS2 196 aaKnown RBP4.46□□□□□ -1.7
CLK1-206ENST00000461326 LRFN1Q9P244 771 aa4.46□□□□□ -1.7
CLK1-206ENST00000461326 LGALS16A8MUM7 142 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 CCNT2O60583 730 aaKnown RBP4.45□□□□□ -1.7
CLK1-206ENST00000461326 CDKL5O76039 1030 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 RASAL1O95294 804 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 ITGA2BP08514 1039 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 NPPBP16860 134 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 MST1P26927 711 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 BMPR1AP36894 532 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 PDE6CP51160 858 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 ZNF134P52741 427 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 ELLP55199 621 aaPredicted RBP4.45□□□□□ -1.7
CLK1-206ENST00000461326 FPGSQ05932 587 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 BOP1Q14137 746 aaKnown RBP4.45□□□□□ -1.7
CLK1-206ENST00000461326 ALFQ53S48 1182 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 TEDDM1Q5T9Z0 273 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.45□□□□□ -1.7
CLK1-206ENST00000461326 SLC30A10Q6XR72 485 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 CCDC28AQ8IWP9 274 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 SLC15A3Q8IY34 581 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 FAM9AQ8IZU1 332 aaPredicted RBP4.45□□□□□ -1.7
CLK1-206ENST00000461326 GALNT15Q8N3T1 639 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 FAM109AQ8N4B1 249 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 ATG16L2Q8NAA4 619 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 RSC1A1Q92681 617 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 FUBP1Q96AE4 644 aaKnown RBP4.45□□□□□ -1.7
CLK1-206ENST00000461326 C18orf8Q96DM3 657 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 KATNAL1Q9BW62 490 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 PCDHAC1Q9H158 963 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 SLC25A32Q9H2D1 315 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 SERHL2Q9H4I8 314 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 OBP2BQ9NPH6 170 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 GJB4Q9NTQ9 266 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 DNAJB11Q9UBS4 358 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 PGAP2Q9UHJ9 254 aa4.45□□□□□ -1.7
CLK1-206ENST00000461326 NDRG4Q9ULP0 352 aaKnown RBP4.45□□□□□ -1.7
CLK1-206ENST00000461326 TRGV11A0A075B6L2 103 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 OR2W5A6NFC9 320 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 AHRRA9YTQ3 701 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 F5H697 171 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 CD3EAPO15446 510 aaKnown RBP4.44□□□□□ -1.7
CLK1-206ENST00000461326 RGS10O43665 173 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 SRGAP2O75044 1071 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 VEGFAP15692 232 aaPredicted RBP4.44□□□□□ -1.7
CLK1-206ENST00000461326 EPHA3P29320 983 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 PRKAR1BP31321 381 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 VAV2P52735 878 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 ARL4CP56559 192 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 MC2RQ01718 297 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 GPS1Q13098 491 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 CCNIQ14094 377 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 CYP2A13Q16696 494 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 BEAN1Q3B7T3 259 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 RBM20Q5T481 1227 aaKnown RBP4.44□□□□□ -1.7
CLK1-206ENST00000461326 ARHGAP40Q5TG30 622 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 B3GNTL1Q67FW5 361 aaPredicted RBP4.44□□□□□ -1.7
CLK1-206ENST00000461326 NSUN7Q8NE18 718 aaKnown RBP4.44□□□□□ -1.7
CLK1-206ENST00000461326 MBD3L2Q8NHZ7 208 aaPredicted RBP4.44□□□□□ -1.7
CLK1-206ENST00000461326 IPO4Q8TEX9 1081 aaKnown RBP4.44□□□□□ -1.7
CLK1-206ENST00000461326 CAVIN3Q969G5 261 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 TMEM125Q96AQ2 219 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 RNF31Q96EP0 1072 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 LRIG1Q96JA1 1093 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 PRPF18Q99633 342 aaKnown RBP4.44□□□□□ -1.7
CLK1-206ENST00000461326 WDR11Q9BZH6 1224 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 TP63Q9H3D4 680 aaPredicted RBP4.44□□□□□ -1.7
CLK1-206ENST00000461326 SMOC2Q9H3U7 446 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 PRDM13Q9H4Q3 707 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 CXorf36Q9H7Y0 433 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 AKIP1Q9NQ31 210 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 TRIM36Q9NQ86 728 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 ZMYND8Q9ULU4 1186 aaPredicted RBP4.44□□□□□ -1.7
CLK1-206ENST00000461326 HPSEQ9Y251 543 aa4.44□□□□□ -1.7
CLK1-206ENST00000461326 VIPP01282 170 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 ELANEP08246 267 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 DHRS4L1P0CG22 281 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 PAX3P23760 479 aa4.43□□□□□ -1.7
CLK1-206ENST00000461326 DDX6P26196 483 aaKnown RBP eCLIP4.43□□□□□ -1.7
CLK1-206ENST00000461326 ZFP36P26651 326 aaKnown RBP4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms