RNA–Protein interactions for RNA: ENST00000461009.1

RAB11FIP3-207, Transcript of RAB11 family interacting protein 3, humanhuman

TSL 2

Gene RAB11FIP3, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP3-207ENST00000461009 SYNPOQ8N3V7 929 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 C12orf29Q8N999 325 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TTC8Q8TAM2 541 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SLC2A14Q8TDB8 520 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 WHAMMQ8TF30 809 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ZFYVE19Q96K21 471 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 HNRNPABQ99729 332 aaKnown RBP14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ARID3AQ99856 593 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ZNF518BQ9C0D4 1074 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SMG9Q9H0W8 520 aaKnown RBP14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 GKN1Q9NS71 199 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 FAM49BQ9NUQ9 324 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 GTSE1Q9NYZ3 720 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TRPM5Q9NZQ8 1165 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PCDHB4Q9Y5E5 795 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TICRRQ7Z2Z1 1910 aa14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 NUP210Q8TEM1 1887 aaPredicted RBP14.01□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ZFHX2Q9C0A1 2572 aaPredicted RBP14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 GREB1Q4ZG55 1949 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 RTN3O95197 1032 aaPredicted RBP14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CKMP06732 381 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PAEPP09466 180 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 FAM200BP0CF97 657 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CHRNB1P11230 501 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PFKLP17858 780 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SLC9A1P19634 815 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ADORA2BP29275 332 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CTHP32929 405 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 RAD23BP54727 409 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SLC8A3P57103 927 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 GRSF1Q12849 480 aaKnown RBP eCLIP14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 FZD5Q13467 585 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 RUNX3Q13761 415 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PDGFRLQ15198 375 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 NFKBIBQ15653 356 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 MIIPQ5JXC2 388 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SMYD5Q6GMV2 418 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TMEM270Q6UE05 265 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TMEM150AQ86TG1 271 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 FUKQ8N0W3 1084 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 NUP93Q8N1F7 819 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SPEM1Q8N4L4 309 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 AOPEPQ8N6M6 819 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SLC4A11Q8NBS3 891 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 RUBCNQ92622 972 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 USP13Q92995 863 aaPredicted RBP14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 LRRC3BQ96PB8 259 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TWNKQ96RR1 684 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 DMAP1Q9NPF5 467 aaPredicted RBP14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PRMT8Q9NR22 394 aaPredicted RBP14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 COMMD8Q9NX08 183 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 RAB23Q9ULC3 237 aa14□□□□□ -0.17
RAB11FIP3-207ENST00000461009 NCANO14594 1321 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SHISA7A6NL88 538 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 VDRP11473 427 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CCDC130P13994 396 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CD19P15391 556 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 HDCP19113 662 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PON1P27169 355 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SOX9P48436 509 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TPM4P67936 248 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 NR1H3Q13133 447 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PON2Q15165 354 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 KRT31Q15323 416 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SGO2Q562F6 1265 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PPP1R26Q5T8A7 1209 aaPredicted RBP13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 PAQR9Q6ZVX9 377 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ARHGEF19Q8IW93 802 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ZNF687Q8N1G0 1237 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CPA6Q8N4T0 437 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 GPR161Q8N6U8 529 aaKnown RBP13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TTC16Q8NEE8 873 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 FUCA2Q9BTY2 467 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 DUSP16Q9BY84 665 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 VPS16Q9H269 839 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 CSNK1G1Q9HCP0 422 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 KRT82Q9NSB4 513 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TAB2Q9NYJ8 693 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 NCDNQ9UBB6 729 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 LIMA1Q9UHB6 759 aaKnown RBP13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ZNF638Q14966 1978 aaKnown RBP13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 DENND4CQ5VZ89 1909 aa13.99□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ATG13O75143 517 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 YWHAQP27348 245 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 IFNAR2P48551 515 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 MAP3K7CLP57077 242 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TNK2Q07912 1038 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 NCAPHQ15003 741 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 STILQ15468 1287 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ZSCAN23Q3MJ62 389 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ARHGAP17Q68EM7 881 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 TSSK4Q6SA08 328 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 UBR7Q8N806 425 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ZBTB44Q8NCP5 570 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 STKLD1Q8NE28 680 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 ATP2A3Q93084 1043 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SLITRK1Q96PX8 696 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 KCNK16Q96T55 309 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 SMOQ99835 787 aa13.98□□□□□ -0.17
RAB11FIP3-207ENST00000461009 FAM83CQ9BQN1 747 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms