RNA–Protein interactions for RNA: ENST00000460023.5

CCDC78-205, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 789 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-205ENST00000460023 GNA14O95837 355 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 MBL2P11226 248 aaPredicted RBP22.7■■□□□ 1.22
CCDC78-205ENST00000460023 ARSAP15289 507 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 CD58P19256 250 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 MORC3Q14149 939 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 TTC16Q8NEE8 873 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 ZMIZ2Q8NF64 920 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 SCAMP5Q8TAC9 235 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 RIN3Q8TB24 985 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 WHAMMQ8TF30 809 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 SEMA4DQ92854 862 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 OTUB2Q96DC9 234 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 DUSP9Q99956 384 aaKnown RBP22.7■■□□□ 1.22
CCDC78-205ENST00000460023 P2RY13Q9BPV8 354 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 CPQQ9Y646 472 aa22.7■■□□□ 1.22
CCDC78-205ENST00000460023 PTPRZ1P23471 2315 aaPredicted RBP22.7■■□□□ 1.22
CCDC78-205ENST00000460023 OTOL1A6NHN0 477 aaPredicted RBP22.69■■□□□ 1.22
CCDC78-205ENST00000460023 LILRB5O75023 590 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 FGFR1OPO95684 399 aaKnown RBP22.69■■□□□ 1.22
CCDC78-205ENST00000460023 ADORA2BP29275 332 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 HOXA6P31267 233 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 SLC8A3P57103 927 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 CLEC20AQ6ZU45 233 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 SLC35C1Q96A29 364 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 TMEM176AQ96HP8 235 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 HEXIM2Q96MH2 286 aaKnown RBP22.69■■□□□ 1.22
CCDC78-205ENST00000460023 TWNKQ96RR1 684 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 DUSP16Q9BY84 665 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 UBXN6Q9BZV1 441 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.69■■□□□ 1.22
CCDC78-205ENST00000460023 CISHQ9NSE2 258 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 SCML2Q9UQR0 700 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 WNT6Q9Y6F9 365 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 USP34Q70CQ2 3546 aa22.69■■□□□ 1.22
CCDC78-205ENST00000460023 RIF1Q5UIP0 2472 aaKnown RBP22.68■■□□□ 1.22
CCDC78-205ENST00000460023 E2F8A0AVK6 867 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 TRIM49BA6NDI0 452 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 P4HA2O15460 535 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 GADD45BO75293 160 aaPredicted RBP22.68■■□□□ 1.22
CCDC78-205ENST00000460023 BEST1O76090 585 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 TBXAS1P24557 533 aaPredicted RBP22.68■■□□□ 1.22
CCDC78-205ENST00000460023 CNR2P34972 360 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 PSEN1P49768 467 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 GALK1P51570 392 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 ORC1Q13415 861 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 GAS6Q14393 721 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 CBWD6Q4V339 395 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 CBWD3Q5JTY5 395 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 CBWD5Q5RIA9 395 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 ISM2Q6H9L7 571 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 ADGRG2Q8IZP9 1017 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 CD101Q93033 1021 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 NACA2Q9H009 215 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 RBM12Q9NTZ6 932 aaKnown RBP22.68■■□□□ 1.22
CCDC78-205ENST00000460023 MYH10P35580 1976 aa22.68■■□□□ 1.22
CCDC78-205ENST00000460023 PPP1R3GB7ZBB8 358 aa22.67■■□□□ 1.22
CCDC78-205ENST00000460023 COCHO43405 550 aa22.67■■□□□ 1.22
CCDC78-205ENST00000460023 TDGF1P13385 188 aa22.67■■□□□ 1.22
CCDC78-205ENST00000460023 ZXDBP98169 803 aa22.67■■□□□ 1.22
CCDC78-205ENST00000460023 CCDC40Q4G0X9 1142 aa22.67■■□□□ 1.22
CCDC78-205ENST00000460023 TADA2BQ86TJ2 420 aa22.67■■□□□ 1.22
CCDC78-205ENST00000460023 NELFBQ8WX92 580 aa22.67■■□□□ 1.22
CCDC78-205ENST00000460023 RUBCNQ92622 972 aa22.67■■□□□ 1.22
CCDC78-205ENST00000460023 SECISBP2LQ93073 1101 aaKnown RBP22.67■■□□□ 1.22
CCDC78-205ENST00000460023 LINC00597Q9H2U6 94 aa22.67■■□□□ 1.22
CCDC78-205ENST00000460023 KIAA1257Q9ULG3 409 aa22.67■■□□□ 1.22
CCDC78-205ENST00000460023 FAM186AA6NE01 2351 aa22.67■■□□□ 1.22
CCDC78-205ENST00000460023 HELZP42694 1942 aaKnown RBP22.67■■□□□ 1.22
CCDC78-205ENST00000460023 CHURC1-FNTBB4DL54 471 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 CD44P16070 742 aaKnown RBP22.66■■□□□ 1.22
CCDC78-205ENST00000460023 GOLGA8FQ08AF8 430 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 GOLGA8DPQ0D2H9 430 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 ZNF394Q53GI3 561 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 PPP1R26Q5T8A7 1209 aaPredicted RBP22.66■■□□□ 1.22
CCDC78-205ENST00000460023 ARHGAP17Q68EM7 881 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 KLHL10Q6JEL2 608 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 FSTL4Q6MZW2 842 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 TTI2Q6NXR4 508 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 KLHDC10Q6PID8 442 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 TSSK4Q6SA08 328 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 ZNF276Q8N554 614 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 TATDN2Q93075 761 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 CDK5RAP1Q96SZ6 601 aaKnown RBP22.66■■□□□ 1.22
CCDC78-205ENST00000460023 EPC1Q9H2F5 836 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 GMIPQ9P107 970 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 CFAP97Q9P2B7 532 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 SH3BP1Q9Y3L3 701 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 MYO15AQ9UKN7 3530 aa22.66■■□□□ 1.22
CCDC78-205ENST00000460023 ACO1P21399 889 aaKnown RBP22.65■■□□□ 1.22
CCDC78-205ENST00000460023 ATP5C1P36542 298 aaKnown RBP22.65■■□□□ 1.22
CCDC78-205ENST00000460023 ANP32AP39687 249 aaKnown RBP22.65■■□□□ 1.22
CCDC78-205ENST00000460023 EIF2DP41214 584 aaKnown RBP22.65■■□□□ 1.22
CCDC78-205ENST00000460023 FMO5P49326 533 aa22.65■■□□□ 1.22
CCDC78-205ENST00000460023 RAD23BP54727 409 aa22.65■■□□□ 1.22
CCDC78-205ENST00000460023 SATB1Q01826 763 aa22.65■■□□□ 1.22
CCDC78-205ENST00000460023 PAK1Q13153 545 aa22.65■■□□□ 1.22
CCDC78-205ENST00000460023 CUL2Q13617 745 aa22.65■■□□□ 1.22
CCDC78-205ENST00000460023 PREPLQ4J6C6 727 aaPredicted RBP22.65■■□□□ 1.22
CCDC78-205ENST00000460023 SUMF1Q8NBK3 374 aa22.65■■□□□ 1.22
CCDC78-205ENST00000460023 SLC4A11Q8NBS3 891 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms