RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 TTC7AQ9ULT0 858 aaPredicted RBP9.41□□□□□ -0.9
VPS50-207ENST00000458530 NLRC5Q86WI3 1866 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 MYO16Q9Y6X6 1858 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 RIF1Q5UIP0 2472 aaKnown RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 ENPP3O14638 875 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 XPO1O14980 1071 aaKnown RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 SART1O43290 800 aaKnown RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 SRGAP2O75044 1071 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 CFHP08603 1231 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 PDGFRBP09619 1106 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 FAM200BP0CF97 657 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 KRT3P12035 628 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 PTPN1P18031 435 aaKnown RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 CXCR5P32302 372 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 SSTR3P32745 418 aaPredicted RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 PLCB3Q01970 1234 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 HADHQ16836 314 aaKnown RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 GLE1Q53GS7 698 aaKnown RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 CLLU1OSQ5K130 101 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 PPP1R26Q5T8A7 1209 aaPredicted RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 FAM102AQ5T9C2 384 aaPredicted RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 RSRC2Q7L4I2 434 aaKnown RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 RTN4RL1Q86UN2 441 aaPredicted RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 XYLT1Q86Y38 959 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 CREG2Q8IUH2 290 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 ADHFE1Q8IWW8 467 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 RHOT1Q8IXI2 618 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 TMEM130Q8N3G9 435 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 NIPA2Q8N8Q9 360 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 PRSS33Q8NF86 280 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 COG1Q8WTW3 980 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 PABPC5Q96DU9 382 aaKnown RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 RUNDC3BQ96NL0 473 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 CPXM1Q96SM3 734 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 PSMB7Q99436 277 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 ACBD6Q9BR61 282 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 TMEM175Q9BSA9 504 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 MED10Q9BTT4 135 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 COLEC11Q9BWP8 271 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 OSBPL7Q9BZF2 842 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 RNF19AQ9NV58 838 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 TBC1D13Q9NVG8 400 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 MTUS1Q9ULD2 1270 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 PACSIN2Q9UNF0 486 aaPredicted RBP9.4□□□□□ -0.9
VPS50-207ENST00000458530 PCDHA3Q9Y5H8 950 aa9.4□□□□□ -0.9
VPS50-207ENST00000458530 PTPRZ1P23471 2315 aaPredicted RBP9.39□□□□□ -0.91
VPS50-207ENST00000458530 MYO7AQ13402 2215 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 VWA8A3KMH1 1905 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 SF3B1O75533 1304 aaKnown RBP eCLIP9.39□□□□□ -0.91
VPS50-207ENST00000458530 TCRBV5S1A1TA0A578 114 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 TMEM191CA6NGB0 347 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 GOLGA8SH3BPF8 625 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 SYN3O14994 580 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 ZNF185O15231 689 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 DDX3YO15523 660 aaKnown RBP9.39□□□□□ -0.91
VPS50-207ENST00000458530 RNF8O76064 485 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 FBXO21O94952 628 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 ERBB2P04626 1255 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 FGFR1P11362 822 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 NPR3P17342 541 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 PSMA2P25787 234 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 ADORA2BP29275 332 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 IRS1P35568 1242 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 LTBRP36941 435 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 PLA2G4AP47712 749 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 OR1G1P47890 313 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 YWHAHQ04917 246 aaPredicted RBP9.39□□□□□ -0.91
VPS50-207ENST00000458530 ELF2Q15723 593 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 CTC1Q2NKJ3 1217 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 PKDCCQ504Y2 493 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 TIGD5Q53EQ6 642 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 MDH1BQ5I0G3 518 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 CYP4A22Q5TCH4 519 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 LRRC38Q5VT99 294 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 OVOS1Q6IE37 1185 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 OR6B2Q6IFH4 312 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 C4orf50Q6ZRC1 276 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 OSTM1Q86WC4 334 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 COLGALT2Q8IYK4 626 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 RASGEF1CQ8N431 466 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 MMGT1Q8N4V1 131 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 WDTC1Q8N5D0 677 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 C12orf29Q8N999 325 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 SPATA4Q8NEY3 305 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 UBA3Q8TBC4 463 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 MYCBPAPQ8TBZ2 947 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 SLC2A14Q8TDB8 520 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 CD101Q93033 1021 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 MCRS1Q96EZ8 462 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 SMARCD1Q96GM5 515 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 RBM41Q96IZ5 413 aaKnown RBP9.39□□□□□ -0.91
VPS50-207ENST00000458530 C17orf80Q9BSJ5 609 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 TRIM62Q9BVG3 475 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 DUSP16Q9BY84 665 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 OXCT2Q9BYC2 517 aaPredicted RBP9.39□□□□□ -0.91
VPS50-207ENST00000458530 GOLPH3Q9H4A6 298 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 DPEP3Q9H4B8 488 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 METTL5Q9NRN9 209 aaKnown RBP9.39□□□□□ -0.91
VPS50-207ENST00000458530 ASNSD1Q9NWL6 643 aa9.39□□□□□ -0.91
VPS50-207ENST00000458530 DDX56Q9NY93 547 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms