RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 ANKRD22Q5VYY1 191 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 DRICH1Q6PGQ1 229 aaPredicted RBP12.31□□□□□ -0.44
VTA1-203ENST00000452973 EXOC3L1Q86VI1 746 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 CCDC13Q8IYE1 715 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 CCHCR1Q8TD31 782 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 TRIB2Q92519 343 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 SLC4A5Q9BY07 1137 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 OSBPL7Q9BZF2 842 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 RSAD1Q9HA92 442 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 PTPN7P35236 360 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 RPL22P35268 128 aaKnown RBP12.31□□□□□ -0.44
VTA1-203ENST00000452973 PCK1P35558 622 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 FLT3LGP49771 235 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 GSCP56915 257 aaPredicted RBP12.31□□□□□ -0.44
VTA1-203ENST00000452973 DPYSL3Q14195 570 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 PAN2Q504Q3 1202 aaKnown RBP12.31□□□□□ -0.44
VTA1-203ENST00000452973 WSCD1Q658N2 575 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 CYP4V2Q6ZWL3 525 aaPredicted RBP12.31□□□□□ -0.44
VTA1-203ENST00000452973 TMEM110Q86TL2 294 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 CYP4X1Q8N118 509 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 TTC13Q8NBP0 860 aa12.31□□□□□ -0.44
VTA1-203ENST00000452973 INTS9Q9NV88 658 aaKnown RBP12.31□□□□□ -0.44
VTA1-203ENST00000452973 APOC4-APOC2K7ER74 178 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 CYB561D2O14569 222 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 PTGESO14684 152 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 TRIM66O15016 1216 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 APOC2P02655 101 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 TKTP29401 623 aaKnown RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 BST2Q10589 180 aaKnown RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 PCBP1Q15365 356 aaKnown RBP eCLIP12.3□□□□□ -0.44
VTA1-203ENST00000452973 CPLX4Q7Z7G2 160 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 SRLQ86TD4 932 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 UNC93AQ86WB7 457 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 C10orf67Q8IYJ2 551 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 DYDC1Q8WWB3 177 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.443e-7■■■■□ 23.2
VTA1-203ENST00000452973 PRMT1Q99873 361 aaKnown RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 MED10Q9BTT4 135 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 SNRNP25Q9BV90 132 aaKnown RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 DHX35Q9H5Z1 703 aaKnown RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 PCDH9Q9HC56 1237 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 TCRBV7S3A2A0A539 114 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 DUSP11O75319 330 aaKnown RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 BCAT1P54687 386 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 MRPS6P82932 125 aaKnown RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 ACAP1Q15027 740 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 TMED2Q15363 201 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 QPCTQ16769 361 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 SV2CQ496J9 727 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 RNASEH2BQ5TBB1 312 aaKnown RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 OSTM1Q86WC4 334 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 SRRM1Q8IYB3 904 aaKnown RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 ANKRD52Q8NB46 1076 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 STMN4Q9H169 189 aaPredicted RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 CNOT10Q9H9A5 744 aaKnown RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 EXOC1LA0A1B0GW35 172 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 TRAPPC3O43617 180 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 FAM107AO95990 144 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 SLC10A3P09131 477 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 MMP13P45452 471 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 HDAC4P56524 1084 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 TAOK1Q7L7X3 1001 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 MAP7D3Q8IWC1 876 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 NETO2Q8NC67 525 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 XPO6Q96QU8 1125 aaKnown RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 CCDC77Q9BR77 488 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 MTG1Q9BT17 334 aaPredicted RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 ROPN1BQ9BZX4 212 aaPredicted RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 ROPN1Q9HAT0 212 aaPredicted RBP12.3□□□□□ -0.44
VTA1-203ENST00000452973 SPC25Q9HBM1 224 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 NAALADL1Q9UQQ1 740 aa12.3□□□□□ -0.44
VTA1-203ENST00000452973 CASTOR2A6NHX0 329 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 BEST1O76090 585 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 KCNE1P15382 129 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 DESP17661 470 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 THPOP40225 353 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 ROR1Q01973 937 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 ADIGQ0VDE8 80 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 MORF4L2Q15014 288 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 HIF1AQ16665 826 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 FAXCQ5TGI0 409 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 TAF2Q6P1X5 1199 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 CROCCP2Q86T23 111 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 NME8Q8N427 588 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 B3GALNT2Q8NCR0 500 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 CPT1BQ92523 772 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 SERPINB12Q96P63 405 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 RNF157Q96PX1 679 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 EFR3BQ9Y2G0 817 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 FAM169AQ9Y6X4 670 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 I3L4J1 428 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 ELNP15502 786 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 PNPLA4P41247 253 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 NDUFV1P49821 464 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 BCAR1P56945 870 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 BBS9Q3SYG4 887 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 MDH1BQ5I0G3 518 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 FNBP1LQ5T0N5 605 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 MFSD14CQ5VZR4 134 aa12.29□□□□□ -0.44
VTA1-203ENST00000452973 CENPUQ71F23 418 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms