RNA–Protein interactions for RNA: ENST00000450533.5

TTC3-210, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 1 (best)

Gene TTC3, Length 2,451 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-210ENST00000450533 CYTH2Q99418 400 aa23.13■■□□□ 1.29
TTC3-210ENST00000450533 SSU72Q9NP77 194 aaKnown RBP23.13■■□□□ 1.29
TTC3-210ENST00000450533 HEY1Q9Y5J3 304 aa23.13■■□□□ 1.29
TTC3-210ENST00000450533 PRPSAP2O60256 369 aa23.13■■□□□ 1.29
TTC3-210ENST00000450533 PTK7Q13308 1070 aa23.13■■□□□ 1.29
TTC3-210ENST00000450533 ACAP1Q15027 740 aa23.13■■□□□ 1.29
TTC3-210ENST00000450533 ZC3H12AQ5D1E8 599 aaKnown RBP23.13■■□□□ 1.29
TTC3-210ENST00000450533 ZNF276Q8N554 614 aa23.13■■□□□ 1.29
TTC3-210ENST00000450533 PTPRN2Q92932 1015 aa23.13■■□□□ 1.29
TTC3-210ENST00000450533 FAF2Q96CS3 445 aa23.13■■□□□ 1.29
TTC3-210ENST00000450533 CYP3A43Q9HB55 503 aa23.13■■□□□ 1.29
TTC3-210ENST00000450533 BARX2Q9UMQ3 279 aaPredicted RBP23.13■■□□□ 1.29
TTC3-210ENST00000450533 DCTN3O75935 186 aa23.12■■□□□ 1.29
TTC3-210ENST00000450533 P4HA1P13674 534 aa23.12■■□□□ 1.29
TTC3-210ENST00000450533 ATP2A2P16615 1042 aaKnown RBP23.12■■□□□ 1.29
TTC3-210ENST00000450533 KRT81Q14533 505 aa23.12■■□□□ 1.29
TTC3-210ENST00000450533 AGGF1Q8N302 714 aaeCLIP23.12■■□□□ 1.294e-7■□□□□ 10.1
TTC3-210ENST00000450533 N4BP2L2Q92802 583 aaPredicted RBP23.12■■□□□ 1.29
TTC3-210ENST00000450533 SERAC1Q96JX3 654 aa23.12■■□□□ 1.29
TTC3-210ENST00000450533 OTOFQ9HC10 1997 aa23.12■■□□□ 1.29
TTC3-210ENST00000450533 NGRNQ9NPE2 291 aaKnown RBP23.12■■□□□ 1.29
TTC3-210ENST00000450533 CYLDQ9NQC7 956 aa23.12■■□□□ 1.29
TTC3-210ENST00000450533 RAB6BQ9NRW1 208 aa23.12■■□□□ 1.29
TTC3-210ENST00000450533 DDNO94850 711 aaPredicted RBP23.11■■□□□ 1.29
TTC3-210ENST00000450533 MT-ND3P03897 115 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 ATICP31939 592 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 FAAP100Q0VG06 881 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 TTLL4Q14679 1199 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 MYCBPQ99417 103 aaPredicted RBP23.11■■□□□ 1.29
TTC3-210ENST00000450533 NUMBLQ9Y6R0 609 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 A0A1B0GUA9 196 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 KCNN4O15554 427 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 ENDOD1O94919 500 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 T-ENOLP0DO92 83 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 STIP1P31948 543 aaKnown RBP23.11■■□□□ 1.29
TTC3-210ENST00000450533 TNFAIP2Q03169 654 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 KCNJ11Q14654 390 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 TAF1BQ53T94 588 aaPredicted RBP23.11■■□□□ 1.29
TTC3-210ENST00000450533 NLRP9Q7RTR0 991 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 CCDC125Q86Z20 511 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 SULF1Q8IWU6 871 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 RFWD2Q8NHY2 731 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 CFAP36Q96G28 342 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 RNF157Q96PX1 679 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 ASB7Q9H672 318 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 EBF2Q9HAK2 575 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 DPP3Q9NY33 737 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 TEX264Q9Y6I9 313 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 IKBKGQ9Y6K9 419 aa23.11■■□□□ 1.29
TTC3-210ENST00000450533 LPXNO60711 386 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 FAM155BO75949 473 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 PFKMP08237 780 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 CCDC14Q49A88 953 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 FYB2Q5VWT5 728 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 PRPF39Q86UA1 669 aaKnown RBP23.1■■□□□ 1.29
TTC3-210ENST00000450533 NSMCE1Q8WV22 266 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 NFKBIZQ9BYH8 718 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 CXCL16Q9H2A7 254 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 LRMDAQ9H2I8 198 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 VRTNQ9H8Y1 702 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 KAT6AQ92794 2004 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 ZNF286BP0CG31 522 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 ZNF200P98182 395 aaPredicted RBP23.1■■□□□ 1.29
TTC3-210ENST00000450533 GOLGA7BQ2TAP0 167 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 MTDHQ86UE4 582 aaKnown RBP23.1■■□□□ 1.29
TTC3-210ENST00000450533 PLD5Q8N7P1 536 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 MANSC1Q9H8J5 431 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 USP29Q9HBJ7 922 aa23.1■■□□□ 1.29
TTC3-210ENST00000450533 TM9SF1O15321 606 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 LGALS2P05162 132 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 INHBAP08476 426 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 IL4RP24394 825 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 TFDP2Q14188 446 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 CA9Q16790 459 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 LRRC6Q86X45 466 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 NLRP7Q8WX94 980 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 DCPSQ96C86 337 aaKnown RBP23.09■■□□□ 1.29
TTC3-210ENST00000450533 RAB3IPQ96QF0 476 aaPredicted RBP23.09■■□□□ 1.29
TTC3-210ENST00000450533 FAM49BQ9NUQ9 324 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 SMAPO00193 183 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 PYGBP11216 843 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 CCND1P24385 295 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 RBL1P28749 1068 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 ELF1P32519 619 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 IREB2P48200 963 aaKnown RBP23.09■■□□□ 1.29
TTC3-210ENST00000450533 FAM187BQ17R55 369 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 PPP1R26Q5T8A7 1209 aaPredicted RBP23.09■■□□□ 1.29
TTC3-210ENST00000450533 PMF1Q6P1K2 205 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 LCLAT1Q6UWP7 414 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 SLC7A6OSQ96CW6 309 aaPredicted RBP23.09■■□□□ 1.29
TTC3-210ENST00000450533 FAM111AQ96PZ2 611 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 NT5C1AQ9BXI3 368 aa23.09■■□□□ 1.29
TTC3-210ENST00000450533 A0A0G2JND7 137 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 INCA1Q0VD86 236 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 FAM47CQ5HY64 1035 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 ERO1BQ86YB8 467 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 SCUBE3Q8IX30 993 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 SLC44A1Q8WWI5 657 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 TTC17Q96AE7 1141 aa23.08■■□□□ 1.29
TTC3-210ENST00000450533 KIF12Q96FN5 646 aa23.08■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms