RNA–Protein interactions for RNA: ENST00000449174.1

COPS7B-213, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 668 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-213ENST00000449174 SMARCD1Q96GM5 515 aa12.35□□□□□ -0.43
COPS7B-213ENST00000449174 TPSD1Q9BZJ3 242 aa12.35□□□□□ -0.43
COPS7B-213ENST00000449174 SMOC1Q9H4F8 434 aa12.35□□□□□ -0.43
COPS7B-213ENST00000449174 DMAP1Q9NPF5 467 aaPredicted RBP12.35□□□□□ -0.43
COPS7B-213ENST00000449174 ARHGEF4Q9NR80 690 aa12.35□□□□□ -0.43
COPS7B-213ENST00000449174 SH3BP1Q9Y3L3 701 aa12.35□□□□□ -0.43
COPS7B-213ENST00000449174 NME7Q9Y5B8 376 aa12.35□□□□□ -0.43
COPS7B-213ENST00000449174 LNP1A1A4G5 178 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 FAM92AA1XBS5 289 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 TNFRSF10BO14763 440 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 POLR2DO15514 142 aaKnown RBP12.34□□□□□ -0.43
COPS7B-213ENST00000449174 KRT37O76014 449 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 CACNA2D1P54289 1103 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 IFRD2Q12894 506 aaPredicted RBP12.34□□□□□ -0.43
COPS7B-213ENST00000449174 LMAN2Q12907 356 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 BIRC3Q13489 604 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 ZNF699Q32M78 642 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 TCEAL6Q6IPX3 200 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 PSAPL1Q6NUJ1 521 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 RHBDF2Q6PJF5 856 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 LPCAT2Q7L5N7 544 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 SLC9A9Q8IVB4 645 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 CCDC33Q8N5R6 958 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 ALLCQ8N6M5 410 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 IL17RCQ8NAC3 791 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 TXNDC5Q8NBS9 432 aaKnown RBP12.34□□□□□ -0.43
COPS7B-213ENST00000449174 ZNF516Q92618 1163 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 TAF4BQ92750 862 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 TCEAL3Q969E4 200 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 MED10Q9BTT4 135 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 FBXO44Q9H4M3 255 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 TMEM9BQ9NQ34 198 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 IL37Q9NZH6 218 aa12.34□□□□□ -0.43
COPS7B-213ENST00000449174 EVLQ9UI08 416 aaPredicted RBP12.34□□□□□ -0.43
COPS7B-213ENST00000449174 C4orf47A7E2U8 309 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 HOXC11O43248 304 aaPredicted RBP12.33□□□□□ -0.44
COPS7B-213ENST00000449174 COCHO43405 550 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 CLSTN1O94985 981 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 KLF8O95600 359 aaPredicted RBP12.33□□□□□ -0.44
COPS7B-213ENST00000449174 RPN1P04843 607 aaKnown RBP12.33□□□□□ -0.44
COPS7B-213ENST00000449174 ZDHHC11BP0C7U3 371 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 CEACAM1P13688 526 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 CSRP1P21291 193 aaKnown RBP12.33□□□□□ -0.44
COPS7B-213ENST00000449174 HOXD12P35452 270 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 TIE1P35590 1138 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 P2RY2P41231 377 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 KIR2DL1P43626 348 aaPredicted RBP12.33□□□□□ -0.44
COPS7B-213ENST00000449174 DHPSP49366 369 aaPredicted RBP12.33□□□□□ -0.44
COPS7B-213ENST00000449174 NOVA1P51513 510 aaKnown RBP12.33□□□□□ -0.44
COPS7B-213ENST00000449174 SLC5A3P53794 718 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 NCOA4Q13772 614 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 SGSM1Q2NKQ1 1148 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 FAM35AQ86V20 835 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 CEP57L1Q8IYX8 460 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 PARD3BQ8TEW8 1205 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 ZFRQ96KR1 1074 aaKnown RBP12.33□□□□□ -0.44
COPS7B-213ENST00000449174 KCNK16Q96T55 309 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 NACA2Q9H009 215 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 GZF1Q9H116 711 aaPredicted RBP12.33□□□□□ -0.44
COPS7B-213ENST00000449174 SMYD3Q9H7B4 428 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 SLC39A2Q9NP94 309 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 FOXD4L1Q9NU39 408 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 TMEM30AQ9NV96 361 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 BCCIPQ9P287 314 aaKnown RBP eCLIP12.33□□□□□ -0.44
COPS7B-213ENST00000449174 CFAP45Q9UL16 551 aa12.33□□□□□ -0.44
COPS7B-213ENST00000449174 TBC1D3BA6NDS4 549 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 SGK1O00141 431 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 CLDN5O00501 218 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 MAP3K13O43283 966 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 C4BPAP04003 597 aaKnown RBP12.32□□□□□ -0.44
COPS7B-213ENST00000449174 MYL1P05976 194 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 CHRM1P11229 460 aaPredicted RBP12.32□□□□□ -0.44
COPS7B-213ENST00000449174 BCKDHBP21953 392 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 SLC6A11P48066 632 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 ME1P48163 572 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 GOLGA8FQ08AF8 430 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 GOLGA8DPQ0D2H9 430 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 LY6G5CQ5SRR4 150 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 RESP18Q5W5W9 173 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 TMEM92Q6UXU6 159 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 UNC93AQ86WB7 457 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 C12orf40Q86WS4 652 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 TTC30AQ86WT1 665 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 ETFBKMTQ8IXQ9 262 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 PHTF2Q8N3S3 785 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 NUSAP1Q9BXS6 441 aaKnown RBP12.32□□□□□ -0.44
COPS7B-213ENST00000449174 DNAI2Q9GZS0 605 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 BLZF1Q9H2G9 400 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 CSNK1G1Q9HCP0 422 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 TLR8Q9NR97 1041 aaKnown RBP12.32□□□□□ -0.44
COPS7B-213ENST00000449174 SPHK2Q9NRA0 654 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 KRT82Q9NSB4 513 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 DEC1Q9P2X7 70 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 INVSQ9Y283 1065 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 ATG2BQ96BY7 2078 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 PLXND1Q9Y4D7 1925 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 NUP205Q92621 2012 aa12.32□□□□□ -0.44
COPS7B-213ENST00000449174 LRRIQ3A6PVS8 624 aaPredicted RBP12.31□□□□□ -0.44
COPS7B-213ENST00000449174 IKBKBO14920 756 aa12.31□□□□□ -0.44
COPS7B-213ENST00000449174 ZBTB24O43167 697 aaPredicted RBP12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms