RNA–Protein interactions for RNA: ENST00000448416.6

SYNPO2-204, Transcript of synaptopodin 2, humanhuman

TSL 2 BASIC

Gene SYNPO2, Length 4,298 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-204ENST00000448416 DCDC5Q6ZRR9 648 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 KATNAL2Q8IYT4 538 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 MCOLN2Q8IZK6 566 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 PPP1R14CQ8TAE6 165 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 DDX17Q92841 729 aaKnown RBP9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 BORCS5Q969J3 196 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 KCNK16Q96T55 309 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 NEURL2Q9BR09 285 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 SLC13A1Q9BZW2 595 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 KLC2Q9H0B6 622 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 KIAA1522Q9P206 1035 aaPredicted RBP9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 ITGA11Q9UKX5 1188 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 IL2RBP14784 551 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 ATP1A4Q13733 1029 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 PCGF5Q86SE9 256 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 CPA5Q8WXQ8 436 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 SHC3Q92529 594 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 THAP11Q96EK4 314 aa9.79□□□□□ -0.84
SYNPO2-204ENST00000448416 MAST2Q6P0Q8 1798 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 PAPPAQ13219 1627 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 CYB561D2O14569 222 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 NDUFB5O43674 189 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 CALCAP01258 141 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 FUCA1P04066 466 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 KRT5P13647 590 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 SLC16A2P36021 539 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 HSPA13P48723 471 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 C21orf59P57076 290 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 WASHC5Q12768 1159 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 STX3Q13277 289 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 SLC15A2Q16348 729 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 CCDC153Q494R4 210 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 C16orf87Q6PH81 154 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 LZTR1Q8N653 840 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 CAAP1Q9H8G2 361 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 SLC38A7Q9NVC3 462 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 IGSF9Q9P2J2 1179 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 PACSIN3Q9UKS6 424 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 TRIM49D1C9J1S8 452 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 K7EPI3 171 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 STAT2P52630 851 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 KCNQ4P56696 695 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 CDKL1Q00532 357 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 CDK18Q07002 472 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 ATP13A4Q4VNC1 1196 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 ANKRD22Q5VYY1 191 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 PPIL6Q8IXY8 311 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 PDIK1LQ8N165 341 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 CENPSQ8N2Z9 138 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 ADCY4Q8NFM4 1077 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 NLRP7Q8WX94 980 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 CMTM5Q96DZ9 223 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 EIF2AK1Q9BQI3 630 aaKnown RBP9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 COPS7BQ9H9Q2 264 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 PCDH9Q9HC56 1237 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 ANLNQ9NQW6 1124 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 RAB20Q9NX57 234 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 ATF5Q9Y2D1 282 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 ZBTB11O95625 1053 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 ITGAXP20702 1163 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 S100A1P23297 94 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 YWHAGP61981 247 aaKnown RBP eCLIP9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 PEX6Q13608 980 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 ADGRE1Q14246 886 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 CES4AQ5XG92 561 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 TTBK2Q6IQ55 1244 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 POTEAQ6S8J7 498 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 ZCCHC23Q6ZST2 131 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 CLVS1Q8IUQ0 354 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 TPH2Q8IWU9 490 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 CTAGE3PQ8IX95 158 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 RNF169Q8NCN4 708 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 PLEKHA8Q96JA3 519 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 ZMAT2Q96NC0 199 aaKnown RBP9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 NRDE2Q9H7Z3 1164 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 AVENQ9NQS1 362 aaPredicted RBP9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 DRG1Q9Y295 367 aaKnown RBP9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 PLLPQ9Y342 182 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 LAMB2P55268 1798 aa9.78□□□□□ -0.84
SYNPO2-204ENST00000448416 MRPS22P82650 360 aaKnown RBP9.77□□□□□ -0.84
SYNPO2-204ENST00000448416 C6orf183Q5T699 404 aa9.77□□□□□ -0.84
SYNPO2-204ENST00000448416 OGFOD2Q6N063 350 aa9.77□□□□□ -0.84
SYNPO2-204ENST00000448416 SH2D5Q6ZV89 423 aa9.77□□□□□ -0.84
SYNPO2-204ENST00000448416 C16orf86Q6ZW13 317 aa9.77□□□□□ -0.84
SYNPO2-204ENST00000448416 C20orf27Q9GZN8 174 aa9.77□□□□□ -0.84
SYNPO2-204ENST00000448416 HESX1Q9UBX0 185 aa9.77□□□□□ -0.84
SYNPO2-204ENST00000448416 ARFGEF1Q9Y6D6 1849 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 GOLGA8TH3BQL2 631 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 GRIN3BO60391 1043 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 ZMPSTE24O75844 475 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 LDHBP07195 334 aaKnown RBP9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 ALDH3B2P48448 385 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 ZNF829Q3KNS6 432 aaPredicted RBP9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 DCAF6Q58WW2 860 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 TMEM214Q6NUQ4 689 aaKnown RBP9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 DRICH1Q6PGQ1 229 aaPredicted RBP9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 SLC44A1Q8WWI5 657 aa9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 DHX38Q92620 1227 aaKnown RBP9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 ZNF512Q96ME7 567 aaPredicted RBP9.77□□□□□ -0.85
SYNPO2-204ENST00000448416 SENP7Q9BQF6 1050 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms