RNA–Protein interactions for RNA: ENST00000447608.1

COL11A1-205, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 5

Gene COL11A1, Length 776 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-205ENST00000447608 SDF4Q9BRK5 362 aa7.13□□□□□ -1.27
COL11A1-205ENST00000447608 CXorf36Q9H7Y0 433 aa7.13□□□□□ -1.27
COL11A1-205ENST00000447608 GBA2Q9HCG7 927 aaPredicted RBP7.13□□□□□ -1.27
COL11A1-205ENST00000447608 SMYD2Q9NRG4 433 aa7.13□□□□□ -1.27
COL11A1-205ENST00000447608 VPS51Q9UID3 782 aa7.13□□□□□ -1.27
COL11A1-205ENST00000447608 DNAJC16Q9Y2G8 782 aa7.13□□□□□ -1.27
COL11A1-205ENST00000447608 ZBTB32Q9Y2Y4 487 aaPredicted RBP7.13□□□□□ -1.27
COL11A1-205ENST00000447608 STX16-NPEPL1H3BU86 382 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 STX16O14662 325 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 CD3EAPO15446 510 aaKnown RBP7.12□□□□□ -1.27
COL11A1-205ENST00000447608 B4GALT4O60513 344 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 HK1P19367 917 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 YY1P25490 414 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 SERPINA4P29622 427 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 MAN2A2P49641 1150 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 RBM5P52756 815 aaKnown RBP eCLIP7.12□□□□□ -1.27
COL11A1-205ENST00000447608 RAC3P60763 192 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.12□□□□□ -1.27
COL11A1-205ENST00000447608 TSTQ16762 297 aaKnown RBP7.12□□□□□ -1.27
COL11A1-205ENST00000447608 FAM205BPQ63HN1 556 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 TMEM108Q6UXF1 575 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 CHD1LQ86WJ1 897 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 CARFQ8N187 725 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 POC1BQ8TC44 478 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 CPT1BQ92523 772 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 ZBTB45Q96K62 511 aaPredicted RBP7.12□□□□□ -1.27
COL11A1-205ENST00000447608 DPYSL5Q9BPU6 564 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 NDUFAF4Q9P032 175 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 TBX20Q9UMR3 447 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 SHROOM2Q13796 1616 aa7.12□□□□□ -1.27
COL11A1-205ENST00000447608 EFCAB8A8MWE9 144 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 KIF28PB7ZC32 967 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 TMCC2O75069 709 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 CER1O95813 267 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 SPATA31D3P0C874 917 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 GNAT2P19087 354 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 PI3P19957 117 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 GCSHP23434 173 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 RAD52P43351 418 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 MAGEA10P43363 369 aaPredicted RBP7.11□□□□□ -1.27
COL11A1-205ENST00000447608 ATXN1P54253 815 aaKnown RBP7.11□□□□□ -1.27
COL11A1-205ENST00000447608 NAP1L1P55209 391 aaKnown RBP7.11□□□□□ -1.27
COL11A1-205ENST00000447608 POU5F1Q01860 360 aaKnown RBP7.11□□□□□ -1.27
COL11A1-205ENST00000447608 PDCLQ13371 301 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 PDXDC1Q6P996 788 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 DRICH1Q6PGQ1 229 aaPredicted RBP7.11□□□□□ -1.27
COL11A1-205ENST00000447608 SPATA31D4Q6ZUB0 917 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 BRINP3Q76B58 766 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 TTC30AQ86WT1 665 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.11□□□□□ -1.27
COL11A1-205ENST00000447608 FBXO15Q8NCQ5 510 aaPredicted RBP7.11□□□□□ -1.27
COL11A1-205ENST00000447608 TMEM171Q8WVE6 324 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 RNF125Q96EQ8 232 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 TMEM176AQ96HP8 235 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 HIST1H2AAQ96QV6 131 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 TREX2Q9BQ50 279 aaPredicted RBP7.11□□□□□ -1.27
COL11A1-205ENST00000447608 NUDT16L1Q9BRJ7 211 aaKnown RBP7.11□□□□□ -1.27
COL11A1-205ENST00000447608 ACAD9Q9H845 621 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 PRKRIP1Q9H875 184 aaPredicted RBP7.11□□□□□ -1.27
COL11A1-205ENST00000447608 UNKLQ9H9P5 680 aaKnown RBP7.11□□□□□ -1.27
COL11A1-205ENST00000447608 FAM53CQ9NYF3 392 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 GPR34Q9UPC5 381 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 USP22Q9UPT9 525 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 CNPY2Q9Y2B0 182 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 CYP46A1Q9Y6A2 500 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 CEP170Q5SW79 1584 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 GRIN2AQ12879 1464 aa7.11□□□□□ -1.27
COL11A1-205ENST00000447608 CCDC195A0A1B0GUA6 201 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 FAM90A20PA6NIJ5 464 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 AGPSO00116 658 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 FFAR3O14843 346 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 SPTLC2O15270 562 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 TIPRLO75663 272 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 RPS6KB1P23443 525 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 KCNC1P48547 511 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 PGDP52209 483 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 CLNS1AP54105 237 aaKnown RBP7.1□□□□□ -1.27
COL11A1-205ENST00000447608 MEA1Q16626 185 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 ZNF761Q86XN6 746 aaPredicted RBP7.1□□□□□ -1.27
COL11A1-205ENST00000447608 SYT12Q8IV01 421 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 ELOA2Q8IYF1 753 aaPredicted RBP7.1□□□□□ -1.27
COL11A1-205ENST00000447608 OR52N2Q8NGI0 321 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 ZNF483Q8TF39 744 aaPredicted RBP7.1□□□□□ -1.27
COL11A1-205ENST00000447608 HMGB4Q8WW32 186 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 MCRS1Q96EZ8 462 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 ZDHHC12Q96GR4 267 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 PNKPQ96T60 521 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 NUDT22Q9BRQ3 303 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 TTPALQ9BTX7 342 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 MECRQ9BV79 373 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 PTDSS2Q9BVG9 487 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 HSFX1Q9UBD0 423 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 NDRG4Q9ULP0 352 aaKnown RBP7.1□□□□□ -1.27
COL11A1-205ENST00000447608 CLCA2Q9UQC9 943 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 ERICH3Q5RHP9 1530 aa7.1□□□□□ -1.27
COL11A1-205ENST00000447608 AATKQ6ZMQ8 1374 aa7.09□□□□□ -1.27
COL11A1-205ENST00000447608 CCDC78A2IDD5 438 aa7.09□□□□□ -1.27
COL11A1-205ENST00000447608 VWA3AA6NCI4 1184 aa7.09□□□□□ -1.27
COL11A1-205ENST00000447608 MROH6A6NGR9 719 aa7.09□□□□□ -1.27
COL11A1-205ENST00000447608 ADM5C9JUS6 153 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms