RNA–Protein interactions for RNA: ENST00000446690.2

COL6A4P1-201, Transcript of collagen type VI alpha 4 pseudogene 1, humanhuman

TSL 2 BASIC

Gene COL6A4P1, Length 2,336 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P1-201ENST00000446690 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 STK32AQ8WU08 396 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 RSAD2Q8WXG1 361 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 CAPNS2Q96L46 248 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 FAM129AQ9BZQ8 928 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 RASSF4Q9H2L5 321 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 DDX43Q9NXZ2 648 aaKnown RBP9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 DRG1Q9Y295 367 aaKnown RBP9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 INPP5FQ9Y2H2 1132 aa9.96□□□□□ -0.81
COL6A4P1-201ENST00000446690 MGEA5O60502 916 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 ITGAVP06756 1048 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 NUDT17P0C025 328 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 PECAM1P16284 738 aaPredicted RBP9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 WARSP23381 471 aaKnown RBP9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 RABGGTBP53611 331 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 ATXN1P54253 815 aaKnown RBP9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 OASLQ15646 514 aaKnown RBP9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 PPP6R3Q5H9R7 873 aaPredicted RBP9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 KDM7AQ6ZMT4 941 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 BBS12Q6ZW61 710 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 TRMT10CQ7L0Y3 403 aaKnown RBP9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 RNF180Q86T96 592 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 PIGZQ86VD9 579 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 ZC3H18Q86VM9 953 aaKnown RBP9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 ZDHHC17Q8IUH5 632 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 TTC13Q8NBP0 860 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 PCSK9Q8NBP7 692 aaKnown RBP9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 SPATA18Q8TC71 538 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 RAET1EQ8TD07 263 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 CCHCR1Q8TD31 782 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 EPS8L3Q8TE67 593 aaKnown RBP9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 FAM149B1Q96BN6 582 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 ADAM2Q99965 735 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 PAAF1Q9BRP4 392 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 RSAD1Q9HA92 442 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 RSPH14Q9UHP6 348 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 EFR3BQ9Y2G0 817 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 TRIP11Q15643 1979 aa9.96□□□□□ -0.82
COL6A4P1-201ENST00000446690 I3L4J1 428 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 RGS16O15492 202 aaPredicted RBP9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 BEST1O76090 585 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 GDF10P55107 478 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 MAP3K7CLP57077 242 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 EIF3EP60228 445 aaKnown RBP9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 ADIGQ0VDE8 80 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 DPYSL3Q14195 570 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 ZSCAN26Q16670 478 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 BOLA3Q53S33 107 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 FAM182AQ5T1J6 154 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 KIAA0319Q5VV43 1072 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 HIBCHQ6NVY1 386 aaPredicted RBP9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 LRRC31Q6UY01 552 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 CYP4V2Q6ZWL3 525 aaPredicted RBP9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 MAP7D3Q8IWC1 876 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 FUKQ8N0W3 1084 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 C3orf58Q8NDZ4 430 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 SLC35B2Q8TB61 432 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 HASPINQ8TF76 798 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 NKD2Q969F2 451 aaPredicted RBP9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 ADAM7Q9H2U9 754 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 TPX2Q9ULW0 747 aaKnown RBP9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 GIT1Q9Y2X7 761 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 SYNJ2BP-COX16A0A087WUM0 186 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 GOLGA8MH3BSY2 632 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 MYO1CO00159 1063 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 DNALI1O14645 258 aaPredicted RBP9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 RASGRF2O14827 1237 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 MAP3K6O95382 1288 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 ACADSBP45954 432 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 HDAC4P56524 1084 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 SKOR1P84550 965 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 LPIN1Q14693 890 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 CA9Q16790 459 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 LONRF1Q17RB8 773 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 AGBL2Q5U5Z8 902 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 CCSAPQ6IQ19 270 aaPredicted RBP9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 DARS2Q6PI48 645 aaKnown RBP9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 LIMS2Q7Z4I7 341 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 FAM71DQ8N9W8 422 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 P3H4Q92791 437 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 C9orf72Q96LT7 481 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 DUSP16Q9BY84 665 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 LRRC4Q9HBW1 653 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 COX16Q9P0S2 106 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 SRRDQ9UH36 339 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 DDX20Q9UHI6 824 aaKnown RBP9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 HEY1Q9Y5J3 304 aa9.95□□□□□ -0.82
COL6A4P1-201ENST00000446690 CEP350Q5VT06 3117 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 APOC4-APOC2K7ER74 178 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 DPYSL4O14531 572 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 XPO1O14980 1071 aaKnown RBP9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 MCF2LO15068 1137 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 B3GAT3O94766 335 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 TTC4O95801 387 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 APOC2P02655 101 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 RBP3P10745 1247 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 HOXD10P28358 340 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 NDUFV1P49821 464 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 ACLYP53396 1101 aa9.94□□□□□ -0.82
COL6A4P1-201ENST00000446690 NKX3-2P78367 333 aa9.94□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms